RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NBEAL1Q6ZS30 2694 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 A0A0A6YYH2 397 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 A6NJ64 397 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 GSTT2P0CG29 244 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 GSTT2BP0CG30 244 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 VDAC2P45880 294 aaPredicted RBP16.26■□□□□ 0.19
CCS-208ENST00000533244 OR3A3P47888 321 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 SERPINB10P48595 397 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 HNF4GQ14541 408 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 NABP2Q9BQ15 211 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 MRPL20Q9BYC9 149 aaKnown RBP16.26■□□□□ 0.19
CCS-208ENST00000533244 C11orf54Q9H0W9 315 aaPredicted RBP16.26■□□□□ 0.19
CCS-208ENST00000533244 GHITMQ9H3K2 345 aa16.26■□□□□ 0.19
CCS-208ENST00000533244 TRBV6-7A0A0A0MS04 114 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 TMEM235A6NFC5 223 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 RAB29O14966 203 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 HSPA12AO43301 675 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 GABARAPO95166 117 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 MOSP00540 346 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 TFAP2AP05549 437 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 VSIG10L2P0DP72 767 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 TALDO1P37837 337 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 ALDH3B2P48448 385 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 PNLIPRP3Q17RR3 467 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 ANKRD13BQ86YJ7 626 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 MAFIPQ8WZ33 124 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 SLC25A46Q96AG3 418 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 ABCG5Q9H222 651 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 PLSCR3Q9NRY6 295 aa16.25■□□□□ 0.19
CCS-208ENST00000533244 IGKV1D-8A0A087WSZ0 117 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 SH2D7A6NKC9 451 aaPredicted RBP16.24■□□□□ 0.19
CCS-208ENST00000533244 VBP1P61758 197 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 PITPNAQ00169 270 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 IGSF11Q5DX21 431 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 DCSTAMPQ9H295 470 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 RDH8Q9NYR8 311 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 VWFP04275 2813 aa16.24■□□□□ 0.19
CCS-208ENST00000533244 SSX5O60225 188 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 CTF1Q16619 201 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 OR8H1Q8NGG4 311 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 NUDCD2Q8WVJ2 157 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 KCTD12Q96CX2 325 aaKnown RBP16.23■□□□□ 0.19
CCS-208ENST00000533244 ABHD14BQ96IU4 210 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 S1PR3Q99500 378 aa16.23■□□□□ 0.19
CCS-208ENST00000533244 NAA50Q9GZZ1 169 aaKnown RBP16.23■□□□□ 0.19
CCS-208ENST00000533244 PROP1O75360 226 aa16.22■□□□□ 0.19
CCS-208ENST00000533244 RPL39P5Q59GN2 51 aa16.22■□□□□ 0.19
CCS-208ENST00000533244 ARSJQ5FYB0 599 aaPredicted RBP16.22■□□□□ 0.19
CCS-208ENST00000533244 Q8N9W7 124 aa16.22■□□□□ 0.19
CCS-208ENST00000533244 PHF21AQ96BD5 680 aa16.22■□□□□ 0.19
CCS-208ENST00000533244 RBMXL1Q96E39 390 aaKnown RBP16.22■□□□□ 0.19
CCS-208ENST00000533244 WNK1Q9H4A3 2382 aa16.22■□□□□ 0.19
CCS-208ENST00000533244 BET1O15155 118 aa16.21■□□□□ 0.19
CCS-208ENST00000533244 GNG2P59768 71 aa16.21■□□□□ 0.19
CCS-208ENST00000533244 OR10J5Q8NHC4 309 aa16.21■□□□□ 0.19
CCS-208ENST00000533244 LIN7CQ9NUP9 197 aaKnown RBP16.21■□□□□ 0.19
CCS-208ENST00000533244 TRAV18A0A075B6X5 111 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 M0QZ24 198 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 CT45A6P0DMU7 189 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 CT45A5P0DMU8 189 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 CT45A7P0DMV0 189 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 UBE2NLQ5JXB2 153 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 FAM71E2Q8N5Q1 922 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 AUNIPQ9H7T9 357 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 DIABLOQ9NR28 239 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 TET2Q6N021 2002 aaPredicted RBP16.2■□□□□ 0.18
CCS-208ENST00000533244 CMYA5Q8N3K9 4069 aa16.2■□□□□ 0.18
CCS-208ENST00000533244 IGHG2P01859 326 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 F2RL1P55085 397 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 C9orf152Q5JTZ5 239 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 GPR107Q5VW38 600 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 H1FOOQ8IZA3 346 aaPredicted RBP16.19■□□□□ 0.18
CCS-208ENST00000533244 C11orf44Q8N8P7 122 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.19■□□□□ 0.18
CCS-208ENST00000533244 ST6GALNAC5Q9BVH7 336 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 GAB2Q9UQC2 676 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 OR5H14A6NHG9 310 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 NCBP2LA6PVI3 153 aaKnown RBP16.19■□□□□ 0.18
CCS-208ENST00000533244 XRCC3O43542 346 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 PEX14O75381 377 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 FBXO24O75426 580 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 CD28P10747 220 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 GPR141Q7Z602 305 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 SAMD12Q8N8I0 201 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 OR5AN1Q8NGI8 311 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
CCS-208ENST00000533244 H0YJW9 148 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 CTXN2P0C2S0 81 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 GPR12P47775 334 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 HIST2H2BDQ6DRA6 164 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 FAM131AQ6UXB0 335 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 TREML4Q6UXN2 200 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 S100A16Q96FQ6 103 aaKnown RBP16.18■□□□□ 0.18
CCS-208ENST00000533244 RITA1Q96K30 269 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 ZNF221Q9UK13 617 aa16.18■□□□□ 0.18
CCS-208ENST00000533244 OR8U9P0C7N5 309 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 ACTBP60709 375 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 C2orf68Q2NKX9 166 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 CNIH2Q6PI25 160 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms