RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 MFNGO00587 321 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 MOSP00540 346 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 CD3GP09693 182 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 SDC2P34741 201 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 SOX6P35712 828 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 LSM3P62310 102 aaKnown RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 MRPS15P82914 257 aaKnown RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 SFXN4Q6P4A7 337 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 FAM110DQ8TAY7 271 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 CITED2Q99967 270 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 NXF2Q9GZY0 626 aaKnown RBP12.2□□□□□ -0.46
CPSF1-210ENST00000532935 IFI27L2Q9H2X8 130 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 DAPK2Q9UIK4 370 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 NOTCH1P46531 2555 aa12.2□□□□□ -0.46
CPSF1-210ENST00000532935 A0A075B6Q4 140 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 SAA2-SAA4A0A096LPE2 208 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 TRDCB7Z8K6 153 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 ST8SIA5O15466 376 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 SCTP09683 121 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 CLEC2LP0C7M8 214 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 SAA2P0DJI9 122 aaPredicted RBP12.19□□□□□ -0.46
CPSF1-210ENST00000532935 HIST1H1DP16402 221 aaKnown RBP12.19□□□□□ -0.46
CPSF1-210ENST00000532935 GNB3P16520 340 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 ZBTB25P24278 435 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 OR3A3P47888 321 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 MXD1Q05195 221 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 NSUN5P1Q3KNT7 163 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 OR5AU1Q8NGC0 362 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
CPSF1-210ENST00000532935 PARP12Q9H0J9 701 aaKnown RBP12.19□□□□□ -0.46
CPSF1-210ENST00000532935 ATG5Q9H1Y0 275 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 OR1A1Q9P1Q5 309 aa12.19□□□□□ -0.46
CPSF1-210ENST00000532935 NCBP2LA6PVI3 153 aaKnown RBP12.18□□□□□ -0.46
CPSF1-210ENST00000532935 SERPINE3A8MV23 424 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 ITGB1BP1O14713 200 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 PLXNB1O43157 2135 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 HSPA12AO43301 675 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 FCGR3AP08637 254 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 SNRPBP14678 240 aaKnown RBP12.18□□□□□ -0.46
CPSF1-210ENST00000532935 CEACAM6P40199 344 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 FAM71F2Q6NXP2 309 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 NDUFA11Q86Y39 141 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 Q8N9W7 124 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
CPSF1-210ENST00000532935 NABP2Q9BQ15 211 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 SLIRPQ9GZT3 109 aaKnown RBP12.18□□□□□ -0.46
CPSF1-210ENST00000532935 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
CPSF1-210ENST00000532935 IGKV1-6A0A0C4DH72 117 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 RAB29O14966 203 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 TMEM127O75204 238 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 RORCP51449 518 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 OR8H1Q8NGG4 311 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 OR4A4PQ8NGN8 299 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 LGALS14Q8TCE9 139 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 EDARADDQ8WWZ3 215 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 S1PR3Q99500 378 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 ZNF251Q9BRH9 671 aa12.17□□□□□ -0.46
CPSF1-210ENST00000532935 C11orf54Q9H0W9 315 aaPredicted RBP12.17□□□□□ -0.46
CPSF1-210ENST00000532935 LIN7CQ9NUP9 197 aaKnown RBP12.17□□□□□ -0.46
CPSF1-210ENST00000532935 ADARB2-AS1A8MUL3 147 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 FABP7O15540 132 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 IGHG2P01859 326 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 F2RL1P55085 397 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 CD83Q01151 205 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 ARFRP1Q13795 201 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 ARL6IP1Q15041 203 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 RPL39P5Q59GN2 51 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 ABHD14BQ96IU4 210 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 ABCG5Q9H222 651 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 GHITMQ9H3K2 345 aa12.16□□□□□ -0.46
CPSF1-210ENST00000532935 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
CPSF1-210ENST00000532935 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 GSTT2P0CG29 244 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 GSTT2BP0CG30 244 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 TALDO1P37837 337 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 GPR12P47775 334 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 SCAND1P57086 179 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 CDNFQ49AH0 187 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 OR4X2Q8NGF9 303 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 MCFD2Q8NI22 146 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 NOL4LQ96MY1 436 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-210ENST00000532935 RASL11BQ9BPW5 248 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms