RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 CCL28Q9NRJ3 127 aa9.86□□□□□ -0.83
CSRP1-215ENST00000532313 WNT2P09544 360 aa9.86□□□□□ -0.83
CSRP1-215ENST00000532313 NUTF2P61970 127 aaKnown RBP9.86□□□□□ -0.83
CSRP1-215ENST00000532313 COL4A4P53420 1690 aaPredicted RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 MSMBP08118 114 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 PGA5P0DJD9 388 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 FAM216BQ8N7L0 139 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 ADAD2Q8NCV1 583 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 CXorf58Q96LI9 332 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 TRAV8-7A0A075B6U6 113 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 PYCARD-AS1I3L0S3 204 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 SIGLEC5O15389 551 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 DUS4LO95620 317 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 CDS2O95674 445 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 TPPP2P59282 170 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 EXOSC2Q13868 293 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 FXYD3Q14802 87 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 MAGT1Q9H0U3 335 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 KLK11Q9UBX7 282 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 U3KQ87 197 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 TRAV40A0A0B4J280 105 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 A0A1W2PPE3 182 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 DPRXA6NFQ7 191 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 UMAD1C9J7I0 102 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 AP4M1O00189 453 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 SYNGR2O43760 224 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 NDUFB6O95139 128 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 MGST1P10620 155 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 IZUMO4Q1ZYL8 232 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 ZNRF1Q8ND25 227 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 RHOVQ96L33 236 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 MESP1Q9BRJ9 268 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 MTCH1Q9NZJ7 389 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 GBF1Q92538 1859 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 CLN5O75503 358 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 SPP1P10451 314 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 PSG2P11465 335 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 RAG2P55895 527 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 NANOS3P60323 173 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 SLC16A13Q7RTY0 426 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 LSM10Q969L4 123 aaKnown RBP9.85□□□□□ -0.83
CSRP1-215ENST00000532313 TMEM133Q9H2Q1 129 aa9.85□□□□□ -0.83
CSRP1-215ENST00000532313 HELTA6NFD8 242 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 METTL15P1P0C7V9 234 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 GLIPR1P48060 266 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 EFNB3Q15768 340 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 AMELYQ99218 206 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 OR1A1Q9P1Q5 309 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 TRBV5-7A0A0A0MS05 114 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
CSRP1-215ENST00000532313 GAMTQ14353 236 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 SLC25A33Q9BSK2 321 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 POMT1Q9Y6A1 747 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 ANAPC1Q9H1A4 1944 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 TRGV3P03979 118 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 MYOD1P15172 320 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 SPCS3P61009 180 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 OR5I1Q13606 314 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 DEFB113Q30KQ7 82 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 Q96M66 194 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 WDR61Q9GZS3 305 aaKnown RBP9.84□□□□□ -0.83
CSRP1-215ENST00000532313 TBL2Q9Y4P3 447 aaKnown RBP9.84□□□□□ -0.83
CSRP1-215ENST00000532313 IGHV3-72A0A0B4J1Y9 119 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 OR5AC1P0C628 307 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 SLC25A4P12235 298 aa9.84□□□□□ -0.83
CSRP1-215ENST00000532313 PRB1P04280 392 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 TLNRD1Q9H1K6 362 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 RNF167Q9H6Y7 350 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 ZNF250P15622 560 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 IRF3Q14653 427 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 WDR25Q64LD2 544 aaPredicted RBP9.83□□□□□ -0.84
CSRP1-215ENST00000532313 QTRT1Q9BXR0 403 aaKnown RBP9.83□□□□□ -0.84
CSRP1-215ENST00000532313 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 ETV2O00321 342 aaPredicted RBP9.83□□□□□ -0.84
CSRP1-215ENST00000532313 SLC25A17O43808 307 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 UBE2V2Q15819 145 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 MIDNQ504T8 468 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 SFT2D1Q8WV19 159 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 C19orf12Q9NSK7 152 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 CCDC88CQ9P219 2028 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 IGKV3-15P01624 115 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 MAS1LP35410 378 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
CSRP1-215ENST00000532313 TSPOP30536 169 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 DAZAP2Q15038 168 aaPredicted RBP9.82□□□□□ -0.84
CSRP1-215ENST00000532313 SP6Q3SY56 376 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 FAM122CQ6P4D5 195 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 TMEM167BQ9NRX6 74 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 TRAV39A0A0B4J263 110 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 UBE2L5PA0A1B0GUS4 154 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 PQLC2LA1A4F0 135 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 H0Y980 276 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 TCF21O43680 179 aa9.82□□□□□ -0.84
CSRP1-215ENST00000532313 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms