RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 RAB25P57735 213 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 FOXE3Q13461 319 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 KIR2DS1Q14954 304 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 MPV17LQ2QL34 196 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 LGALS14Q8TCE9 139 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 RTN4IP1Q8WWV3 396 aaPredicted RBP10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 FAM3DQ96BQ1 224 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 CMTM3Q96MX0 182 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 S1PR3Q99500 378 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 TSC22D3Q99576 134 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 COMMD3Q9UBI1 195 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 SPATA2Q9UM82 520 aa10.05□□□□□ -0.8
TM9SF1-211ENST00000531406 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 A0A1W2PP11 408 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 SLC31A2O15432 143 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 RAMP3O60896 148 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 ELANEP08246 267 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 GTF2F2P13984 249 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 TALDO1P37837 337 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 CDX1P47902 265 aaPredicted RBP10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 GPR176Q14439 515 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 Q3ZCU0 254 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 SLC22A6Q4U2R8 563 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 UBE2NLQ5JXB2 153 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 GLIPR1L1Q6UWM5 242 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 LYPD6Q86Y78 171 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 SAMD12Q8N8I0 201 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 RASL11BQ9BPW5 248 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
TM9SF1-211ENST00000531406 A0A0B4J203 849 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 FAM25AB3EWG3 89 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 FAM25CB3EWG5 89 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 FAM25GB3EWG6 89 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 C12orf77C9JDV5 145 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 SCGNO76038 276 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 RAB6AP20340 208 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 ZNF137PP52743 207 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 CFHR3Q02985 330 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 LAX1Q8IWV1 398 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 ZNF439Q8NDP4 499 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 OR5M8Q8NGP6 311 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 OR6Q1Q8NGQ2 317 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 OR8U1Q8NH10 309 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 KCNG3Q8TAE7 436 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 S100ZQ8WXG8 99 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 PTX4Q96A99 478 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 RBMXL1Q96E39 390 aaKnown RBP10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 SPACA1Q9HBV2 294 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 RCC2Q9P258 522 aaKnown RBP10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 DNAH9Q9NYC9 4486 aa10.03□□□□□ -0.8
TM9SF1-211ENST00000531406 TMEM272A0A1B0GTI8 110 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 MCRIP1C9JLW8 97 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 SPINT2O43291 252 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 TXNL1O43396 289 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 IGHG4P01861 327 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 APOA1P02647 267 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 ZNF134P52741 427 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 F2RL1P55085 397 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 C2orf76Q3KRA6 126 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 SPANXN2Q5MJ10 180 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 C9orf66Q5T8R8 295 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 OR10V1Q8NGI7 309 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 OR4K15Q8NH41 348 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 URM1Q9BTM9 101 aaKnown RBP10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 TMEM59Q9BXS4 323 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 RHBDL2Q9NX52 303 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 GNG12Q9UBI6 72 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 ZNF580Q9UK33 172 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 RAB22AQ9UL26 194 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 RYR3Q15413 4870 aa10.02□□□□□ -0.81
TM9SF1-211ENST00000531406 METTL21EPA6NDL7 271 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 TMEM14DPA8MWL7 114 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 SEC14L6B5MCN3 397 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 CTDSP2O14595 271 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 HPGDSO60760 199 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 CRTAPO75718 401 aaPredicted RBP10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 HBZP02008 142 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 IGF1P05019 195 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 RCC1P18754 421 aaPredicted RBP10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 VDAC1P21796 283 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 LSAMPQ13449 338 aa10.01□□□□□ -0.81
TM9SF1-211ENST00000531406 C6orf183Q5T699 404 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms