RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 RITA1Q96K30 269 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 B9D2Q9BPU9 175 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 PLEKHJ1Q9NW61 149 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 KIAA1456Q9P272 454 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 DNAH9Q9NYC9 4486 aa17.42■□□□□ 0.38
TRAPPC4-210ENST00000531290 NBR2O15453 112 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 BLVRBP30043 206 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 LIN54Q6MZP7 749 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 C11orf87Q6NUJ2 197 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 TM2D1Q9BX74 207 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 OR51J1Q9H342 316 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 PARP11Q9NR21 331 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 PIPOXQ9P0Z9 390 aa17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 AK6Q9Y3D8 172 aaKnown RBP17.41■□□□□ 0.38
TRAPPC4-210ENST00000531290 SAA2-SAA4A0A096LPE2 208 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 PDCD5O14737 125 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 SLC22A1O15245 554 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 BPNT1O95861 308 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 HLA-DRB1P01911 266 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 SAA2P0DJI9 122 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 ARSBP15848 533 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 CNTFRP26992 372 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 PSMB9P28065 219 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 LUMP51884 338 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 C5orf64Q2M2E5 130 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 NICN1Q9BSH3 213 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 RIMS4Q9H426 269 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 NDUFB11Q9NX14 153 aa17.4■□□□□ 0.38
TRAPPC4-210ENST00000531290 TMEM14DPA8MWL7 114 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 SEC14L6B5MCN3 397 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 MYL9P24844 172 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 UNC119Q13432 240 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 RAB11BQ15907 218 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 UBE2UQ5VVX9 321 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 FAM71F2Q6NXP2 309 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 OR11H1Q8NG94 326 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 UBE2E2Q96LR5 201 aa17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 URM1Q9BTM9 101 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-210ENST00000531290 TRAV41A0A0B4J266 112 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 G3V318 75 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 SLC17A2O00624 439 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 RAB29O14966 203 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 ATP6V0E1O15342 81 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 ST8SIA5O15466 376 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 NAPSAO96009 420 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 GALP22466 123 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 PPIFP30405 207 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 QRFPP83859 136 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 SSX1Q16384 188 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZNF773Q6PK81 442 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 MOB1BQ7L9L4 216 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 NPBQ8NG41 125 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 KLK15Q9H2R5 256 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 IFI27L2Q9H2X8 130 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 KCNK15Q9H427 330 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 SLC23A1Q9UHI7 598 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 VSIG4Q9Y279 399 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 V9GY05 133 aa17.38■□□□□ 0.37
TRAPPC4-210ENST00000531290 IGHV7-81A0A0B4J1V7 117 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 TRDV1A0A1B0GX56 115 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 CD37P11049 281 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 P2RY14Q15391 338 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZNF880Q6PDB4 577 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 OR1N2Q8NGR9 330 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 GHITMQ9H3K2 345 aa17.37■□□□□ 0.37
TRAPPC4-210ENST00000531290 TRAV1-2A0A0B4J238 106 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 ECI1P42126 302 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 FHL3Q13643 280 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 PLGLAQ15195 96 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 FAM131AQ6UXB0 335 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZNF491Q8N8L2 437 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 MYOZ3Q8TDC0 251 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 LPAR5Q9H1C0 372 aa17.36■□□□□ 0.37
TRAPPC4-210ENST00000531290 A0A0A6YYD4 124 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 SOCS1O15524 211 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 HSPA12AO43301 675 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 NDUFA3O95167 84 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 IGLV1-40P01703 118 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 GSTP1P09211 210 aaKnown RBP17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 OR8U8P0C7N1 319 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 CT45A6P0DMU7 189 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 CT45A5P0DMU8 189 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 CT45A7P0DMV0 189 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 MC5RP33032 325 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 RAB9AP51151 201 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZNF260Q3ZCT1 412 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 RPL39P5Q59GN2 51 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 CD200R1LQ6Q8B3 271 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 OR5B12Q96R08 314 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 GNB4Q9HAV0 340 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 AK3Q9UIJ7 227 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 SCOCQ9UIL1 159 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 MGAT4AQ9UM21 535 aa17.35■□□□□ 0.37
TRAPPC4-210ENST00000531290 TRBV6-6A0A0A6YYG2 114 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 OR5H14A6NHG9 310 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 H7C2Y5 167 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZBTB25P24278 435 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 CEACAM6P40199 344 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 RUNX1Q01196 453 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms