RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MT-ND4P03905 459 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A13PP0C7W8 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 HSMCR30P0CW71 290 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 MGMTP16455 207 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 CPEP16870 476 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 GZMHP20718 246 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 NFYBP25208 207 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 SSTR5P35346 364 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 TALDO1P37837 337 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 EFNB2P52799 333 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 KRTAP10-11P60412 298 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 RPS25P62851 125 aaKnown RBP6.75□□□□□ -1.33
SSBP3-212ENST00000528930 HERPUD1Q15011 391 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 HSD17B12Q53GQ0 312 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 ZNF497Q6ZNH5 498 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 OR10A7Q8NGE5 316 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 OR9G1Q8NH87 305 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 RFESDQ8TAC1 157 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM203Q969S6 136 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 Q96M66 194 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 GFI1Q99684 422 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 MGLLQ99685 303 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 SELENOIQ9C0D9 397 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 RANBP3Q9H6Z4 567 aaPredicted RBP6.75□□□□□ -1.33
SSBP3-212ENST00000528930 RAB18Q9NP72 206 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 GHRLQ9UBU3 117 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 TBC1D24Q9ULP9 559 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 PSG11Q9UQ72 335 aa6.75□□□□□ -1.33
SSBP3-212ENST00000528930 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM30CPA0ZSE6 113 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 MCRIP1C9JLW8 97 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 CCRL2O00421 344 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 TOR1AO14656 332 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 ORC5O43913 435 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 CRTAPO75718 401 aaPredicted RBP6.74□□□□□ -1.33
SSBP3-212ENST00000528930 IGHV3-7P01780 117 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 HOXA5P20719 270 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 GABRA5P31644 462 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 RFX2P48378 723 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 PRRX1P54821 245 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 QRFPP83859 136 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 FABP5Q01469 135 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 TRAM1Q15629 374 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 SSX1Q16384 188 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 TPTE2P1Q5T6R2 138 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 GLT8D1Q68CQ7 371 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 OR10K2Q6IF99 312 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 RAB12Q6IQ22 244 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 FAM53AQ6NSI3 398 aaPredicted RBP6.74□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM219Q86XT9 240 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 CCDC107Q8WV48 283 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 CFHR4Q92496 578 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 LEAP2Q969E1 77 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 FAM46BQ96A09 425 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 MMP28Q9H239 520 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 KCNK15Q9H427 330 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 ZNF702PQ9H963 129 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 SPACA1Q9HBV2 294 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
SSBP3-212ENST00000528930 FAM90A9PA6NNJ1 464 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 TMEM14DPA8MWL7 114 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 AIPO00170 330 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 F2RL2O00254 374 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 CTDSP2O14595 271 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 GLAP06280 429 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 UBBP0CG47 229 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 FUT3P21217 361 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 GADD45AP24522 165 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 CD24P25063 80 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 PSMA1P25786 263 aaKnown RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 HTR2CP28335 458 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 TNFSF8P32971 234 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 RORCP51449 518 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 NKX2-5P52952 324 aaPredicted RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 BLCAPP62952 87 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 RPS27AP62979 156 aaKnown RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 EGFEM1PQ0D2K5 195 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 UNC119Q13432 240 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 DIAPH2-AS1Q14236 149 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 RBM39Q14498 530 aaKnown RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 HABP2Q14520 560 aaPredicted RBP6.73□□□□□ -1.33
SSBP3-212ENST00000528930 LTC4SQ16873 150 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 HACD4Q5VWC8 232 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 NRARPQ7Z6K4 114 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 SNX29P2Q8IUI4 249 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 Q8N2B8 174 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 OR52M1Q8NGK5 317 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 OR6M1Q8NGM8 313 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 OR4C13Q8NGP0 309 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 OR5H6Q8NGV6 325 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 OR4K15Q8NH41 348 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 UBALD1Q8TB05 177 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 NEK7Q8TDX7 302 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 GIMAP1Q8WWP7 306 aa6.73□□□□□ -1.33
SSBP3-212ENST00000528930 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms