RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PSMA1P25786 263 aaKnown RBP8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 VEGFCP49767 419 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 OR10A3P58181 314 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 FOXE3Q13461 319 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 MMDQ15546 238 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 TBCEQ15813 527 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 DEFB136Q30KP8 78 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 MOGAT2Q3SYC2 334 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 HES5Q5TA89 166 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 GLDNQ6ZMI3 551 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 NPBQ8NG41 125 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 OR2AK2Q8NG84 335 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 ABHD14BQ96IU4 210 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 KCTD7Q96MP8 289 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 URM1Q9BTM9 101 aaKnown RBP8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 PECRQ9BY49 303 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 ACOT13Q9NPJ3 140 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 ABRACLQ9P1F3 81 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 SLC23A1Q9UHI7 598 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 HSF4Q9ULV5 492 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 KCNK7Q9Y2U2 307 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 V9GY05 133 aa8.16□□□□□ -1.1
PRPF40B-204ENST00000527253 A0A0B4J203 849 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 NBR2O15453 112 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 DUS4LO95620 317 aaKnown RBP8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 IGHG4P01861 327 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 ELANEP08246 267 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 PSMB8P28062 276 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 PPIFP30405 207 aaKnown RBP8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 CEACAM6P40199 344 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 CDX1P47902 265 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 LINC00205P59089 165 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 HLA-DRB3P79483 266 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 C5orf64Q2M2E5 130 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 CD200R1LQ6Q8B3 271 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 FAM131AQ6UXB0 335 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 MOB1BQ7L9L4 216 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF367Q7RTV3 350 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 NR2C2APQ86WQ0 139 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 VCX3BQ9H321 246 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 RIMS4Q9H426 269 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 STEAP1Q9UHE8 339 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF580Q9UK33 172 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 RNF150Q9ULK6 438 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 FBXO7Q9Y3I1 522 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 WSB1Q9Y6I7 421 aa8.15□□□□□ -1.1
PRPF40B-204ENST00000527253 TRAV1-2A0A0B4J238 106 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 H0YJW9 148 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 CCL24O00175 119 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 FCN1O00602 326 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 ITGB1BP1O14713 200 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB29O14966 203 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 ATP6V0E1O15342 81 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 DENRO43583 198 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 RRP9O43818 475 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 NDUFA3O95167 84 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 HLA-DRB1P01911 266 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 VDAC1P21796 283 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 SLC6A1P30531 599 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 HSPA13P48723 471 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 NDPQ00604 133 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 KIR2DS1Q14954 304 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 CXorf66Q5JRM2 361 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 FAM71F2Q6NXP2 309 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 OR5AN1Q8NGI8 311 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 MYOZ3Q8TDC0 251 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 PTX4Q96A99 478 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 CMSS1Q9BQ75 279 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 GON7Q9BXV9 100 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 OR51J1Q9H342 316 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 NDUFB11Q9NX14 153 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 PIPOXQ9P0Z9 390 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB26Q9ULW5 256 aa8.14□□□□□ -1.11
PRPF40B-204ENST00000527253 TRDV1A0A1B0GX56 115 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 TRDCB7Z8K6 153 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 CD3GP09693 182 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 C19orf54Q5BKX5 351 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 ASPHD1Q5U4P2 390 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 LIN54Q6MZP7 749 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 ZNF383Q8NA42 475 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 DRAXINQ8NBI3 349 aaPredicted RBP8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 MINDY2Q8NBR6 621 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 OR56B1Q8NGI3 324 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 FBXL15Q9H469 300 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 GNB4Q9HAV0 340 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 C12orf4Q9NQ89 552 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 PARP11Q9NR21 331 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB22AQ9UL26 194 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 GAB2Q9UQC2 676 aa8.13□□□□□ -1.11
PRPF40B-204ENST00000527253 TRAV41A0A0B4J266 112 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 RAB27BO00194 218 aa8.12□□□□□ -1.11
PRPF40B-204ENST00000527253 RRHO14718 337 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms