RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GNPDA2Q8TDQ7 276 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 GEMIN6Q8WXD5 167 aaKnown RBP3.46□□□□□ -1.86
CD44-213ENST00000525209 GALMQ96C23 342 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 ATXN7L3BQ96GX2 97 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 SMIM8Q96KF7 97 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 RNF157Q96PX1 679 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 GABARAPL3Q9BY60 117 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 DEFB127Q9H1M4 99 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 PARLQ9H300 379 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 ACER3Q9NUN7 267 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 RFNGQ9Y644 331 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 LTBP1Q14766 1721 aa3.46□□□□□ -1.86
CD44-213ENST00000525209 C2orf16Q68DN1 1984 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 WDR81Q562E7 1941 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 BORCS7-ASMTA0A0B4J1R7 106 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 A0A0G2JN53 185 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 WI2-2373I1.2A0A1W2PRP0 233 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 C5orf49A4QMS7 147 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 OR5H14A6NHG9 310 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 ZNF850A8MQ14 1090 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 H3BP45 60 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 NTN3O00634 580 aaPredicted RBP3.45□□□□□ -1.86
CD44-213ENST00000525209 COPEO14579 308 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 FFAR1O14842 300 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 LYPLA1O75608 230 aaPredicted RBP3.45□□□□□ -1.86
CD44-213ENST00000525209 APOA2P02652 100 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 FGF6P10767 208 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 FOLR2P14207 255 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 ZBTB25P24278 435 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 P2RX1P51575 399 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 SLC18A1P54219 525 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 TAS2R46P59540 309 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 ZNF616Q08AN1 781 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 C16orf72Q14CZ0 275 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 HERPUD1Q15011 391 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 SIX1Q15475 284 aaPredicted RBP3.45□□□□□ -1.86
CD44-213ENST00000525209 GRK1Q15835 563 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 MESTQ5EB52 335 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 ZNF575Q86XF7 245 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 C20orf196Q8IYI0 205 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 NUP37Q8NFH4 326 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 OR13A1Q8NGR1 328 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 REEP6Q96HR9 211 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 CNBD2Q96M20 576 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 CCDC115Q96NT0 180 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 SPACA5Q96QH8 159 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 SFXN3Q9BWM7 321 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 TMEM126AQ9H061 195 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 EDA2RQ9HAV5 297 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 MMP26Q9NRE1 261 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 UQCC1Q9NVA1 299 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 TRMT112Q9UI30 125 aaKnown RBP3.45□□□□□ -1.86
CD44-213ENST00000525209 SSR3Q9UNL2 185 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 SLC25A15Q9Y619 301 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 KIAA0100Q14667 2235 aaKnown RBP3.45□□□□□ -1.86
CD44-213ENST00000525209 MYH10P35580 1976 aa3.45□□□□□ -1.86
CD44-213ENST00000525209 NRXN2Q9P2S2 1712 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 MYH2Q9UKX2 1941 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 LRRK1Q38SD2 2015 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 YLPM1P49750 1951 aaKnown RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 A0A087WW49 117 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 H7C1C5 153 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 ZNF207O43670 478 aaKnown RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 IGLV2-14P01704 120 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 CRYBA1P05813 215 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 MPC1LP0DKB6 136 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 RAB3AP20336 220 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 NCBP2P52298 156 aaKnown RBP eCLIP3.44□□□□□ -1.86
CD44-213ENST00000525209 ZNF138P52744 262 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 LCN6P62502 163 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 RPS28P62857 69 aaKnown RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 HLA-DRB3P79483 266 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 EMX2Q04743 252 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 PAX8Q06710 450 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 IL15RAQ13261 267 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 JOSD1Q15040 202 aaPredicted RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 RGNQ15493 299 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 OR8B8Q15620 311 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 RNF212Q495C1 297 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 CENPWQ5EE01 88 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 FAM222AQ5U5X8 452 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 LCN8Q6JVE9 175 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 AGTRAPQ6RW13 159 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 LINC00173Q6ZV60 143 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 VN1R4Q7Z5H5 301 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 KLHDC8BQ8IXV7 354 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 Q8N1X5 172 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
CD44-213ENST00000525209 RFLNBQ8N5W9 214 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 LINC00337Q8N6G1 96 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 AQP11Q8NBQ7 271 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 OR8B12Q8NGG6 310 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 OR2G3Q8NGZ4 309 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 OR8S1Q8NH09 359 aa3.44□□□□□ -1.86
CD44-213ENST00000525209 ZNF675Q8TD23 568 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms