RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 MIOXQ9UGB7 285 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 PSG11Q9UQ72 335 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 TLN1Q9Y490 2541 aaKnown RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 SPTA1P02549 2419 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 CADP27708 2225 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 IGHV3-43A0A0B4J1X8 118 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 B8ZZF3 427 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 FAM90A26D6RGX4 464 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 RAB29O14966 203 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 SCAF4O95104 1147 aaKnown RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 TFF1P04155 84 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 IGHV3-43DP0DP04 118 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 S100A1P23297 94 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 IL3RAP26951 378 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 LOXP28300 417 aaPredicted RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 RPL12P30050 165 aaKnown RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 LPAR6P43657 344 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 THBS3P49746 956 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 ERVK-16P61578 105 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 RPL23AP62750 156 aaKnown RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 TAGLNQ01995 201 aaKnown RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 IL15RAQ13261 267 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 DTX2Q86UW9 622 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 FOXRED2Q8IWF2 684 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 OR8H3Q8N146 312 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 ZCCHC24Q8N2G6 241 aaKnown RBP8.28□□□□□ -1.08
VPS13B-212ENST00000524330 OR8B3Q8NGG8 313 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 SCARB1Q8WTV0 552 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 OR8B2Q96RD0 313 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
VPS13B-212ENST00000524330 PIEZO2Q9H5I5 2752 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 ST8SIA5O15466 376 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 RBFOX2O43251 390 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS13B-212ENST00000524330 CGB3P0DN86 165 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 CGB7P0DN87 165 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 NFYBP25208 207 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 HTR2BP41595 481 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 UQCRFS1P47985 274 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 TMEM33P57088 247 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 TMEM155Q4W5P6 130 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 C5orf24Q7Z6I8 188 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 SPAG16Q8N0X2 631 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 RAB40CQ96S21 281 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 CLCC1Q96S66 551 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 RNF126Q9BV68 326 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 SDHAF2Q9NX18 166 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 RPUSD1Q9UJJ7 312 aaKnown RBP8.27□□□□□ -1.09
VPS13B-212ENST00000524330 RALYQ9UKM9 306 aaKnown RBP8.27□□□□□ -1.09
VPS13B-212ENST00000524330 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
VPS13B-212ENST00000524330 PCNX1Q96RV3 2341 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 A6NNC1 897 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 FAM90A9PA6NNJ1 464 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 MPTX1A8MV57 137 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 M0R1X1 148 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 DVL1O14640 695 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 SIAH2O43255 324 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 JTBO76095 146 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 HPRT1P00492 218 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 MBPP02686 304 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-212ENST00000524330 RRASP10301 218 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 LOXL3P58215 753 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 EXOSC2Q13868 293 aaKnown RBP8.26□□□□□ -1.09
VPS13B-212ENST00000524330 CDSNQ15517 529 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 C17orf58Q2M2W7 97 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 NMSQ5H8A3 153 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 CLLU1Q5K131 121 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 HEPN1Q6WQI6 88 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 OR4S2Q8NH73 311 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 LHFPL5Q8TAF8 219 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 ST8SIA2Q92186 375 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 NEIL1Q96FI4 390 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-212ENST00000524330 DCTN5Q9BTE1 182 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 GSX2Q9BZM3 304 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 HEXA-AS1Q9H8Q6 139 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 CHODLQ9H9P2 273 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 UBTD1Q9HAC8 227 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 OR5AC2Q9NZP5 309 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
VPS13B-212ENST00000524330 KLF2Q9Y5W3 355 aaPredicted RBP8.26□□□□□ -1.09
VPS13B-212ENST00000524330 TANC2Q9HCD6 1990 aa8.26□□□□□ -1.09
VPS13B-212ENST00000524330 HCFC1P51610 2035 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 MGAQ8IWI9 3026 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 CACNA1AO00555 2505 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 TOR1AO14656 332 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 TNFRSF13BO14836 293 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 PPIHO43447 177 aaKnown RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 IGHV2-70P01814 119 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 RBP4P02753 201 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 EPHA1P21709 976 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 PRRX1P54821 245 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 HOXA4Q00056 320 aaPredicted RBP8.25□□□□□ -1.09
VPS13B-212ENST00000524330 ID3Q02535 119 aa8.25□□□□□ -1.09
VPS13B-212ENST00000524330 BAXQ07812 192 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms