RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ZNF57Q68EA5 555 aaPredicted RBP3.13□□□□□ -1.91
CLK4-207ENST00000520909 RAB12Q6IQ22 244 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 ZNF826PQ6ZT77 177 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 FAM58AQ8N1B3 248 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 OSR2Q8N2R0 312 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 POC5Q8NA72 575 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 C19orf18Q8NEA5 215 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 OR10R2Q8NGX6 335 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 C15orf40Q8WUR7 153 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 ITLN1Q8WWA0 313 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 AQP3Q92482 292 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 EMG1Q92979 244 aaKnown RBP3.13□□□□□ -1.91
CLK4-207ENST00000520909 RAB3CQ96E17 227 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 ARHGAP5-AS1Q96IT6 56 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 NEDD4LQ96PU5 975 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 OR2V2Q96R30 315 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 SDHCQ99643 169 aaPredicted RBP3.13□□□□□ -1.91
CLK4-207ENST00000520909 DHRS9Q9BPW9 319 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 NICN1Q9BSH3 213 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 CCDC32Q9BV29 185 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 PKIBQ9C010 78 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 LPAR5Q9H1C0 372 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 AUNIPQ9H7T9 357 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 FN3KRPQ9HA64 309 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 DYNLRB1Q9NP97 96 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 RBFOX1Q9NWB1 397 aaKnown RBP3.13□□□□□ -1.91
CLK4-207ENST00000520909 C1orf123Q9NWV4 160 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 IL36GQ9NZH8 169 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 MTCH1Q9NZJ7 389 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 RABL2AQ9UBK7 228 aaPredicted RBP3.13□□□□□ -1.91
CLK4-207ENST00000520909 RABL2BQ9UNT1 228 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 ST3GAL6Q9Y274 331 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 POLDIP2Q9Y2S7 368 aa3.13□□□□□ -1.91
CLK4-207ENST00000520909 KMT2BQ9UMN6 2715 aaPredicted RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 COL12A1Q99715 3063 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 AKAP6Q13023 2319 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ISPDA4D126 451 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 MEIS3P1A6NDR6 274 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TMEM235A6NFC5 223 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GABARAPH6UMI1 98 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 M0R233 179 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GEMIN2O14893 280 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 DEGS1O15121 323 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 CTDSPLO15194 276 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 AKR7A2O43488 359 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GSTZ1O43708 216 aaPredicted RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 RBBP9O75884 186 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 OR7C1O76099 320 aaPredicted RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 IGHV1-46P01743 117 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 FCER2P06734 321 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 CD3GP09693 182 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 CSF3P09919 207 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GSTT2BP0CG30 244 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 PGA5P0DJD9 388 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GP9P14770 177 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TMEM11P17152 192 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 FUT3P21217 361 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 CPT2P23786 658 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 MPZP25189 248 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 LOXP28300 417 aaPredicted RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 RBMXP38159 391 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 PMELP40967 661 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 CD200P41217 278 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 RBM11P57052 281 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 DEFA1P59665 94 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 DEFA3P59666 94 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GNG2P59768 71 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 FGF12P61328 243 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 SNRPD2P62316 118 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 CCL8P80075 99 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 MRPS10P82664 201 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 IFITM3Q01628 133 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ZNF154Q13106 437 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 MAB21L1Q13394 359 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ARFRP1Q13795 201 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TAF9Q16594 264 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 RGS21Q2M5E4 152 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 SPRNQ5BIV9 151 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ATAD3CQ5T2N8 411 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 OLFML2AQ68BL7 652 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ELP2Q6IA86 826 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 C6orf201Q7Z4U5 140 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TRAPPC6BQ86SZ2 158 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 RTN4RL2Q86UN3 420 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 Q8IYB0 196 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 ZCCHC24Q8N2G6 241 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 FAM89BQ8N5H3 189 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 OR11L1Q8NGX0 322 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 LRRC29Q8WV35 223 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 SMIM4Q8WVI0 70 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TOMM40LQ969M1 308 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 YIPF5Q969M3 257 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 MRPS24Q96EL2 167 aaKnown RBP3.12□□□□□ -1.91
CLK4-207ENST00000520909 NRIP2Q9BQI9 281 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 FAAP24Q9BTP7 215 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TM2D1Q9BX74 207 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 PECRQ9BY49 303 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 TLNRD1Q9H1K6 362 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 GNB4Q9HAV0 340 aa3.12□□□□□ -1.91
CLK4-207ENST00000520909 PALMDQ9NP74 551 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms