RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 RWDD4Q6NW29 188 aaKnown RBP-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 EBLN2Q6P2I7 272 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 NDUFAF7Q7L592 441 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 OOSP2Q86WS3 158 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 LINC00311Q8N616 119 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 CCDC110Q8TBZ0 833 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 ATP6V0BQ99437 205 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 TMEM43Q9BTV4 400 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 NUP58Q9BVL2 599 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 CHST6Q9GZX3 395 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 NXF2Q9GZY0 626 aaKnown RBP-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 METTL17Q9H7H0 456 aaPredicted RBP-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 POMPQ9Y244 141 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 OR51B2Q9Y5P1 312 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 SPTBN2O15020 2390 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 BCL9O00512 1426 aa-2.35□□□□□ -2.79
RNU6-557P-201ENST00000516842 SPAG17Q6Q759 2223 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 REREQ9P2R6 1566 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CHD8Q9HCK8 2581 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZNF736B4DX44 427 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 H7C0C1 242 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 IQCF3P0C7M6 154 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 DBTP11182 482 aaKnown RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 SFTPCP11686 197 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 PSMB8P28062 276 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 MDH1P40925 334 aaKnown RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CRATP43155 626 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 SSR1P43307 286 aaKnown RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CRYBB2P43320 205 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 ATP5OP48047 213 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 TPD52L1Q16890 204 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 TRMT5Q32P41 509 aaKnown RBP-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CDNFQ49AH0 187 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 C6orf226Q5I0X4 101 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CDKL4Q5MAI5 379 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 CCDC91Q7Z6B0 441 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 OR9G4Q8NGQ1 327 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 ITFG2Q969R8 447 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 RCN3Q96D15 328 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 WDR54Q9H977 334 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 ACTR3BQ9P1U1 418 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 FANCMQ8IYD8 2048 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 GREB1Q4ZG55 1949 aa-2.36□□□□□ -2.79
RNU6-557P-201ENST00000516842 KIF16BQ96L93 1317 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SCN3AQ9NY46 2000 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 IGHV2-26A0A0B4J1V2 119 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SIRPB1O00241 398 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 NPYP01303 97 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 CLTAP09496 248 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 CA5AP35218 305 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 CAMLGP49069 296 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 RAB14P61106 215 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 HIST1H4AP62805 103 aaKnown RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SCGB2A2Q13296 93 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 PDK2Q15119 407 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 TAF7Q15545 349 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 MRPL23Q16540 153 aaKnown RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 LINC01554Q52M75 96 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SPATA12Q7Z6I5 190 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZNF619Q8N2I2 560 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 PACRGLQ8N7B6 248 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SPATA4Q8NEY3 305 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 PIH1D2Q8WWB5 315 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 PSMF1Q92530 271 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 CCDC47Q96A33 483 aaKnown RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 SYAP1Q96A49 352 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 PLEKHB2Q96CS7 222 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 CCDC43Q96MW1 224 aaKnown RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 EBNA1BP2Q99848 306 aaKnown RBP-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 COMMD5Q9GZQ3 224 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 C11orf49Q9H6J7 331 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 NINJ2Q9NZG7 142 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 BAIAP2Q9UQB8 552 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 FIS1Q9Y3D6 152 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 BCORL1Q5H9F3 1711 aa-2.37□□□□□ -2.79
RNU6-557P-201ENST00000516842 A0A087WSZ3 146 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 C21orf140B9A014 251 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 UBE2L6O14933 153 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 ZMPSTE24O75844 475 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 RAB2AP61019 212 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 UBE2MP61081 183 aaKnown RBP-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 GTF2BQ00403 316 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 NADK2Q4G0N4 442 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 TTC23LQ6PF05 361 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 FAM111AQ96PZ2 611 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 AGMATQ9BSE5 352 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 SLC7A5P2Q9GIP4 190 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 SLC25A31Q9H0C2 315 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 RASL12Q9NYN1 266 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 NAT8Q9UHE5 227 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 TNFSF18Q9UNG2 199 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 RBMX2Q9Y388 322 aaKnown RBP-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 TBL2Q9Y4P3 447 aaKnown RBP-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 U3KQV3 271 aa-2.38□□□□□ -2.79
RNU6-557P-201ENST00000516842 TTC21AQ8NDW8 1320 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 SCN10AQ9Y5Y9 1956 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 ATRQ13535 2644 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 TRAV25A0A0B4J276 109 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 IGHV2OR16-5A0A0B4J2B6 119 aa-2.39□□□□□ -2.79
RNU6-557P-201ENST00000516842 A0A1B0GXF2 115 aa-2.39□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms