RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ZNF841Q6ZN19 808 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 SELENOHQ8IZQ5 122 aaKnown RBP7.54□□□□□ -1.2
CPNE4-213ENST00000515418 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 SLC35G3Q8N808 338 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 CT45A3Q8NHU0 189 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 CORO2AQ92828 525 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 C18orf12Q96KH6 178 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 TOLLIPQ9H0E2 274 aa7.54□□□□□ -1.2
CPNE4-213ENST00000515418 KLF2Q9Y5W3 355 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF729A6NN14 1252 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-213ENST00000515418 YPEL1O60688 119 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 COL8A1P27658 744 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 DLX1P56177 255 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-213ENST00000515418 MEF2CQ06413 473 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-213ENST00000515418 IAH1Q2TAA2 248 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF695Q8IW36 515 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 FOXRED2Q8IWF2 684 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 LGI3Q8N145 548 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 NRGNQ92686 78 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 SPOCK3Q9BQ16 436 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 SDHAF2Q9NX18 166 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 GFOD1Q9NXC2 390 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 IDI2-AS1Q9NZ38 188 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 JPT1Q9UK76 154 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 LINC00312Q9Y6C7 94 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ANKRD17O75179 2603 aaKnown RBP7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ARPC5O15511 151 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 TSC22D2O75157 780 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 CDS2O95674 445 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 IFNA21P01568 189 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 WNT2P09544 360 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 RPA2P15927 270 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 CXCL2P19875 107 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 GNG10P50151 68 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 BRWD1-AS2P59051 145 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 IFITM2Q01629 132 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 IZUMO4Q1ZYL8 232 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 Q3ZCU0 254 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF585BQ52M93 769 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 RPL39P5Q59GN2 51 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 LRTM2Q8N967 370 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 RAB1CQ92928 201 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 AKR1E2Q96JD6 320 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 TMEM56Q96MV1 263 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 ZNF714Q96N38 554 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 RNF126Q9BV68 326 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 CHODLQ9H9P2 273 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 TMEM56-RWDD3S4R434 201 aa7.53□□□□□ -1.2
CPNE4-213ENST00000515418 LINC00473A8K010 186 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 H0Y980 276 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 H0YIZ8 118 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 OVOL3O00110 214 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 RAMP3O60896 148 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 RGS11O94810 467 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 MPC2O95563 127 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 IGKV1-39P01597 117 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 IGKV1D-39P04432 117 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 SERPINE2P07093 398 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 UCP1P25874 307 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 PSMB6P28072 239 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 S100GP29377 79 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 GPR12P47775 334 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 EFNA4P52798 201 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 AP2S1P53680 142 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-213ENST00000515418 TMEM33P57088 247 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 MRPS11P82912 194 aaKnown RBP7.52□□□□□ -1.21
CPNE4-213ENST00000515418 EIF4EBP1Q13541 118 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-213ENST00000515418 RAB32Q13637 225 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 OR52M1Q8NGK5 317 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 TIMD4Q96H15 378 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 NMES1Q9C002 83 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 LINC00574Q9H8X3 128 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 COMMD9Q9P000 198 aa7.52□□□□□ -1.21
CPNE4-213ENST00000515418 C17orf98A8MV24 154 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 IL15RAQ13261 267 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 WDR25Q64LD2 544 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 ZNF546Q86UE3 836 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 EDARADDQ8WWZ3 215 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 IFI27L2Q9H2X8 130 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 GAL3ST2Q9H3Q3 398 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 TAS2R3Q9NYW6 316 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 MBD2Q9UBB5 411 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 RPUSD1Q9UJJ7 312 aaKnown RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 CSMD1Q96PZ7 3565 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 A0A0G2JRQ6 117 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 FSTL3O95633 263 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 IGHV4-39P01824 125 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 GPR6P46095 362 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-213ENST00000515418 DLX6P56179 175 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 S100A10P60903 97 aa7.51□□□□□ -1.21
CPNE4-213ENST00000515418 CYCSP99999 105 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms