RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CDK10Q15131 360 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 SLC9A3R2Q15599 337 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 BRD3OSQ6XYD6 125 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 Q6ZPA2 131 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 SLC25A48Q6ZT89 311 aaKnown RBP16.34■□□□□ 0.21
USP53-208ENST00000514305 OR52I2Q8NH67 350 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 PIPOXQ9P0Z9 390 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 BUB1B-PAK6H3BSN5 160 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 SLC22A5O76082 557 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 PPP1CCP36873 323 aaKnown RBP16.33■□□□□ 0.2
USP53-208ENST00000514305 DLX1P56177 255 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 AP3S2P59780 193 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 IGSF11Q5DX21 431 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 TMEM17Q86X19 198 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 GDPD1Q8N9F7 314 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 RPEQ96AT9 228 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 PGPEP1Q9NXJ5 209 aa16.33■□□□□ 0.2
USP53-208ENST00000514305 ZNF736B4DX44 427 aaPredicted RBP16.32■□□□□ 0.2
USP53-208ENST00000514305 IFNA6P05013 189 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 OR5H8P0DN80 308 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 INPP1P49441 399 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 TAS2R19P59542 299 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 PRB3Q04118 309 aaPredicted RBP16.32■□□□□ 0.2
USP53-208ENST00000514305 RUSC1-AS1Q66K80 236 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 Q8N402 240 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 TMEM229BQ8NBD8 167 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 OR4P4Q8NGL7 312 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 LEAP2Q969E1 77 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 S1PR3Q99500 378 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 RDH8Q9NYR8 311 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 ZNF221Q9UK13 617 aa16.32■□□□□ 0.2
USP53-208ENST00000514305 RAB29O14966 203 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 TXNL1O43396 289 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 IGHV3-7P01780 117 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 TSPAN5P62079 268 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
USP53-208ENST00000514305 SNAPC3Q92966 411 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 BORCS5Q969J3 196 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 THAP7Q9BT49 309 aaPredicted RBP16.31■□□□□ 0.2
USP53-208ENST00000514305 ABCB10Q9NRK6 738 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 EHFQ9NZC4 300 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 OR1A1Q9P1Q5 309 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 KLK11Q9UBX7 282 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 V9GYH0 126 aa16.31■□□□□ 0.2
USP53-208ENST00000514305 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 IGKV1-6A0A0C4DH72 117 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 BTBD17A6NE02 478 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 GAPDHP04406 335 aaKnown RBP16.3■□□□□ 0.2
USP53-208ENST00000514305 HLA-DMAP28067 261 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 BRS3P32247 399 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 FAUP35544 74 aaKnown RBP16.3■□□□□ 0.2
USP53-208ENST00000514305 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
USP53-208ENST00000514305 DGCR2P98153 550 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 GNMTQ14749 295 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 HERPUD1Q15011 391 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 AANATQ16613 207 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
USP53-208ENST00000514305 CT45A1Q5HYN5 189 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 PRR31Q5SQ13 230 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 H1FOOQ8IZA3 346 aaPredicted RBP16.3■□□□□ 0.2
USP53-208ENST00000514305 LYG1Q8N1E2 194 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 ZNF439Q8NDP4 499 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 OR6F1Q8NGZ6 308 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 CT45A3Q8NHU0 189 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 GIMAP1Q8WWP7 306 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 DEDD2Q8WXF8 326 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 TOMM40LQ969M1 308 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 MEGF9Q9H1U4 602 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 DPAGT1Q9H3H5 408 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 OR2W1Q9Y3N9 320 aa16.3■□□□□ 0.2
USP53-208ENST00000514305 A0A0U1RQK1 487 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 MDFIC2A0A1B0GVS7 189 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 HOXA3O43365 443 aaPredicted RBP16.29■□□□□ 0.2
USP53-208ENST00000514305 FCER2P06734 321 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 DYRK1AQ13627 763 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 MEF2DQ14814 521 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 DEFB112Q30KQ8 113 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 FAM71F2Q6NXP2 309 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 C16orf87Q6PH81 154 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 OVCH2Q7RTZ1 564 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 OR8H3Q8N146 312 aa16.29■□□□□ 0.2
USP53-208ENST00000514305 WDR12Q9GZL7 423 aaKnown RBP16.29■□□□□ 0.2
USP53-208ENST00000514305 C11orf54Q9H0W9 315 aaPredicted RBP16.29■□□□□ 0.2
USP53-208ENST00000514305 SOX21Q9Y651 276 aaPredicted RBP16.29■□□□□ 0.2
USP53-208ENST00000514305 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 PMP2P02689 132 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 AKAIN1P0CW23 69 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 FCGR2CP31995 323 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 HRH1P35367 487 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 GPR12P47775 334 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 HERV-K104P61576 105 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 SSX2Q16385 188 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 VAX1Q5SQQ9 334 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 TPTE2P1Q5T6R2 138 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 TRIQKQ629K1 86 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 C5orf24Q7Z6I8 188 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 TOMM5Q8N4H5 51 aa16.28■□□□□ 0.2
USP53-208ENST00000514305 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms