RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TMEM236Q5W0B7 351 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 DCXRQ7Z4W1 244 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 C1orf174Q8IYL3 243 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 ZNF101Q8IZC7 436 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 PNKDQ8N490 385 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR10G2Q8NGC3 310 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR52H1Q8NGJ2 320 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR5D13Q8NGL4 314 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR11L1Q8NGX0 322 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR6N2Q8NGY6 317 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR13G1Q8NGZ3 307 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR2T4Q8NH00 348 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR8S1Q8NH09 359 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 OR51F2Q8NH61 342 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 ZNF420Q8TAQ5 688 aaPredicted RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 TEX47Q8TBZ9 253 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CANT1Q8WVQ1 401 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 TMEM158Q8WZ71 300 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 APOBEC3DQ96AK3 386 aaPredicted RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 CYYR1Q96J86 154 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 MBOAT4Q96T53 435 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 SDHCQ99643 169 aaPredicted RBP2.93□□□□□ -1.94
HTT-210ENST00000512909 COPS4Q9BT78 406 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 ARMC1Q9NVT9 282 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 TVP23BQ9NYZ1 205 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 NPTNQ9Y639 398 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CACNG2Q9Y698 323 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 CELSR2Q9HCU4 2923 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 PCNX1Q96RV3 2341 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 COL12A1Q99715 3063 aa2.93□□□□□ -1.94
HTT-210ENST00000512909 MPDZO75970 2070 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 SPTAN1Q13813 2472 aaKnown RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 A0A0G2JRQ6 117 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 FAM240BA0A1B0GVZ2 78 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 DHRS12A0PJE2 317 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 F5H5P2 479 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 TCF21O43680 179 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 FKBP6O75344 327 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ATP5HO75947 161 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 CYB5R3P00387 301 aaPredicted RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 HMGN1P05114 100 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 MSMBP08118 114 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 DUX4L4P0CJ87 422 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 COX5BP10606 129 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ZNF3P17036 446 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ELK1P19419 428 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 TUBG1P23258 451 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 RGS6P49758 472 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ESRRGP62508 458 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ECH1Q13011 328 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 MRPL28Q13084 256 aaKnown RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 DNAL1Q4LDG9 190 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 SPRNQ5BIV9 151 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 KLF17Q5JT82 389 aaPredicted RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 C1orf100Q5SVJ3 147 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 RPL13AP3Q6NVV1 102 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 RASSF6Q6ZTQ3 369 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 CCDC121Q6ZUS5 278 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 FAM122BQ7Z309 247 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 C19orf18Q8NEA5 215 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 OR8G5Q8NG78 346 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 OR10AD1Q8NGE0 317 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 OR2AE1Q8NHA4 323 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 C22orf15Q8WYQ4 148 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 POP5Q969H6 163 aaKnown RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 SLAMF6Q96DU3 332 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ASB9Q96DX5 294 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ZMYND19Q96E35 227 aaPredicted RBP2.92□□□□□ -1.94
HTT-210ENST00000512909 COQ2Q96H96 371 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 OR2V2Q96R30 315 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 NIPSNAP1Q9BPW8 284 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 NRIP2Q9BQI9 281 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 TTTY10Q9BZA0 68 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 PLA2G12AQ9BZM1 189 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 HDHD2Q9H0R4 259 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 TUBG2Q9NRH3 451 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 TMEM106BQ9NUM4 274 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 KIF25Q9UIL4 384 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 IKZF2Q9UKS7 526 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 BAIAP2Q9UQB8 552 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 POLDIP2Q9Y2S7 368 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 KCNIP3Q9Y2W7 256 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 LHFPL6Q9Y693 200 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 PKDREJQ9NTG1 2253 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 NOTCH2Q04721 2471 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 PDZD2O15018 2839 aa2.92□□□□□ -1.94
HTT-210ENST00000512909 CACNA1CQ13936 2221 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 IGLV3-9A0A075B6K5 115 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 PPIAL4EA0A075B759 164 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 IGHV3OR15-7A0A075B7D8 119 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 IGLV1-36A0A0B4J1U3 117 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 BTBD17A6NE02 478 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 OR5B21A6NL26 309 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 G3V2T6 193 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 H3BSH0 61 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 M0R135 149 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 BHLHE40O14503 412 aa2.91□□□□□ -1.94
HTT-210ENST00000512909 CA11O75493 328 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms