RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR5R1Q8NH85 324 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 NUDCD2Q8WVJ2 157 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 TOMM40LQ969M1 308 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 RITA1Q96K30 269 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 KCTD7Q96MP8 289 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 CITED1Q99966 193 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 CABLES2Q9BTV7 478 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF747Q9BV97 191 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 MRPL20Q9BYC9 149 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 C12orf4Q9NQ89 552 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 RHBDL2Q9NX52 303 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF230Q9UIE0 474 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 JPT1Q9UK76 154 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 TRAPPC2LQ9UL33 140 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 SSR3Q9UNL2 185 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 WNK1Q9H4A3 2382 aa5.73□□□□□ -1.49
TOPBP1-207ENST00000509162 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 SAA2-SAA4A0A096LPE2 208 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 IGHV1-3A0A0C4DH29 117 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 CLPSL1A2RUU4 121 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 PDCD5O14737 125 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 AIREO43918 545 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 CA11O75493 328 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 TSPAN15O95858 294 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 EIF4EP06730 217 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 SAA2P0DJI9 122 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 CNTFRP26992 372 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF260Q3ZCT1 412 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 MORN2Q502X0 79 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 RPL39P5Q59GN2 51 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 IGSF11Q5DX21 431 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 TCTEX1D4Q5JR98 221 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 C6orf183Q5T699 404 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 OR52W1Q6IF63 320 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 C12orf54Q6X4T0 127 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 ZNF833PQ6ZTB9 187 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 IZUMO1Q8IYV9 350 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 DTX3Q8N9I9 347 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 RTN4IP1Q8WWV3 396 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 SNAPC3Q92966 411 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 NEDD4LQ96PU5 975 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 AGMATQ9BSE5 352 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 ABHD14AQ9BUJ0 271 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 DPAGT1Q9H3H5 408 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 PLSCR3Q9NRY6 295 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 RAB22AQ9UL26 194 aa5.72□□□□□ -1.49
TOPBP1-207ENST00000509162 A0A075B6Q4 140 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 hCG_1809904A0A1W2PP81 198 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A1W2PPE2 198 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A1W2PR64 198 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 A0A1W2PRV1 198 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 LINC01548A6NM66 108 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 LEUTXA8MZ59 168 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 IGKV1D-33P01593 117 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 IGKV1-33P01594 117 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 GSTT2P0CG29 244 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 GSTT2BP0CG30 244 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 GZMHP20718 246 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 RPL15P61313 204 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 HTD2P86397 168 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 NDPQ00604 133 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 MADCAM1Q13477 382 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 EBI3Q14213 229 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 SPCS2Q15005 226 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 Q3ZCU0 254 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 LY6G6FQ5SQ64 297 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 GDPGP1Q6ZNW5 385 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 Q6ZTK2 550 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 MOB1BQ7L9L4 216 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF554Q86TJ5 538 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 TPRA1Q86W33 373 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 KLHDC1Q8N7A1 406 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 C5orf56Q8N8D9 126 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 ZNF565Q8N9K5 539 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 OR56B1Q8NGI3 324 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 SETD6Q8TBK2 473 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 PTX4Q96A99 478 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 RPEQ96AT9 228 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 RAB3CQ96E17 227 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 ABHD14BQ96IU4 210 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 NABP2Q9BQ15 211 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 CMSS1Q9BQ75 279 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 SLC25A33Q9BSK2 321 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 URM1Q9BTM9 101 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 MRPS26Q9BYN8 205 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 TOLLIPQ9H0E2 274 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 RBM38Q9H0Z9 239 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 RANBP3Q9H6Z4 567 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 PCDHB16Q9NRJ7 776 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 PLEKHJ1Q9NW61 149 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 ANAPC10Q9UM13 185 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 SPATA2Q9UM82 520 aa5.71□□□□□ -1.5
TOPBP1-207ENST00000509162 IGKV1D-13A0A0B4J2D9 117 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 FABP7O15540 132 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 LANCL1O43813 399 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 YPEL1O60688 119 aa5.7□□□□□ -1.5
TOPBP1-207ENST00000509162 OR2F2O95006 317 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms