RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 SOCS1O15524 211 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 NDUFA3O95167 84 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 BPNT1O95861 308 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 CT45A6P0DMU7 189 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 CT45A5P0DMU8 189 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 CT45A7P0DMV0 189 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 RAB9AP51151 201 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 TMEM50BP56557 158 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 RUNX1Q01196 453 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 DCTN2Q13561 401 aaKnown RBP9.73□□□□□ -0.85
PDPN-208ENST00000509009 LIPKQ5VXJ0 399 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 OR6M1Q8NGM8 313 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 AGMATQ9BSE5 352 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 PARP12Q9H0J9 701 aaKnown RBP9.73□□□□□ -0.85
PDPN-208ENST00000509009 LPAR5Q9H1C0 372 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 RIMS4Q9H426 269 aaPredicted RBP9.73□□□□□ -0.85
PDPN-208ENST00000509009 GNB4Q9HAV0 340 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 CHMP1AQ9HD42 196 aaPredicted RBP9.73□□□□□ -0.85
PDPN-208ENST00000509009 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 PIPOXQ9P0Z9 390 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 SLC23A1Q9UHI7 598 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
PDPN-208ENST00000509009 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 SEC14L6B5MCN3 397 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 FCN1O00602 326 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 SLC17A2O00624 439 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 ITGB1BP1O14713 200 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 PROP1O75360 226 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 P2RY14Q15391 338 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 RPL39P5Q59GN2 51 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 ASPHD1Q5U4P2 390 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 ZNF660Q6AZW8 331 aaPredicted RBP9.72□□□□□ -0.85
PDPN-208ENST00000509009 FAM71F2Q6NXP2 309 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 SETD6Q8TBK2 473 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 NRG4Q8WWG1 115 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 ABHD14BQ96IU4 210 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 HDHD3Q9BSH5 251 aaPredicted RBP9.72□□□□□ -0.85
PDPN-208ENST00000509009 URM1Q9BTM9 101 aaKnown RBP9.72□□□□□ -0.85
PDPN-208ENST00000509009 C11orf54Q9H0W9 315 aaPredicted RBP9.72□□□□□ -0.85
PDPN-208ENST00000509009 ISYNA1Q9NPH2 558 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 AK3Q9UIJ7 227 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 VSIG4Q9Y279 399 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 TPRKBQ9Y3C4 175 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 AK6Q9Y3D8 172 aaKnown RBP9.72□□□□□ -0.85
PDPN-208ENST00000509009 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
PDPN-208ENST00000509009 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
PDPN-208ENST00000509009 RRHO14718 337 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 EGR2P11161 476 aaPredicted RBP9.71□□□□□ -0.86
PDPN-208ENST00000509009 ARSBP15848 533 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 MC5RP33032 325 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 CEACAM6P40199 344 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 ECI1P42126 302 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
PDPN-208ENST00000509009 CX3CL1P78423 397 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 ZNF260Q3ZCT1 412 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 FAM131AQ6UXB0 335 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 GLDNQ6ZMI3 551 aaPredicted RBP9.71□□□□□ -0.86
PDPN-208ENST00000509009 MOB1BQ7L9L4 216 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 OR5AN1Q8NGI8 311 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 UFD1Q92890 307 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 PRR25Q96S07 402 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 GHITMQ9H3K2 345 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 FBXL15Q9H469 300 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 KIAA1456Q9P272 454 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 HSF4Q9ULV5 492 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 FBXO7Q9Y3I1 522 aa9.71□□□□□ -0.86
PDPN-208ENST00000509009 SORL1Q92673 2214 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 H0YJW9 148 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 SOX15O60248 233 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 SCTP09683 121 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
PDPN-208ENST00000509009 HSMCR30P0CW71 290 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 CPEP16870 476 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 ZBTB25P24278 435 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 VEGFCP49767 419 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 CRIP2P52943 208 aaPredicted RBP9.7□□□□□ -0.86
PDPN-208ENST00000509009 AQP4P55087 323 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 GNB1P62873 340 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 NDPQ00604 133 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 ZNF616Q08AN1 781 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 TRAM1Q15629 374 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 C2orf76Q3KRA6 126 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 PTX4Q96A99 478 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 RNF5Q99942 180 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 PLGRKTQ9HBL7 147 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 Q9N2K0 584 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 OR1A1Q9P1Q5 309 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 STAB2Q8WWQ8 2551 aa9.7□□□□□ -0.86
PDPN-208ENST00000509009 OR5H14A6NHG9 310 aa9.69□□□□□ -0.86
PDPN-208ENST00000509009 H7C2Y5 167 aa9.69□□□□□ -0.86
PDPN-208ENST00000509009 HSPA12AO43301 675 aa9.69□□□□□ -0.86
PDPN-208ENST00000509009 RGS10O43665 173 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms