RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PDPK2PQ6A1A2 396 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 LCN8Q6JVE9 175 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 SCGB1D4Q6XE38 83 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 FUNDC1Q8IVP5 155 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 OR11H1Q8NG94 326 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 ERMNQ8TAM6 284 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 CDCA4Q9BXL8 241 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 IMP3Q9NV31 184 aaKnown RBP1.35□□□□□ -2.19
LSM6-205ENST00000507449 DNAJC12Q9UKB3 198 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 FIS1Q9Y3D6 152 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 SNX10Q9Y5X0 201 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 MYO5BQ9ULV0 1848 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 DOCK6Q96HP0 2047 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 IGHV3-73A0A0B4J1V6 119 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 LINC00862A6NCI5 91 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 CCRL2O00421 344 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 STK16O75716 305 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 HBZP02008 142 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 P0DMU3 169 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 FAM231AP0DMU4 169 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 FAM231CP0DMU5 169 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 CCL3P10147 92 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 CXCL2P19875 107 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 CXCL3P19876 107 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 CRYBB3P26998 211 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 LPAR6P43657 344 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 RPL14P50914 215 aaKnown RBP1.34□□□□□ -2.19
LSM6-205ENST00000507449 H2BFSP57053 126 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 RWDD2BP57060 319 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 HERVK_113P63121 156 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 TMEM176BQ3YBM2 270 aaPredicted RBP1.34□□□□□ -2.19
LSM6-205ENST00000507449 DNAL1Q4LDG9 190 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 PCOTHQ58A44 107 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 SDHAF4Q5VUM1 108 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 LGALS9CQ6DKI2 356 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 RASL11AQ6T310 242 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 DRAM2Q6UX65 266 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 ZNF767PQ75MW2 155 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 ATP5L2Q7Z4Y8 100 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 OR4K13Q8NH42 304 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 OR10A6Q8NH74 314 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 DNAJB3Q8WWF6 145 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 OR7D2Q96RA2 312 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 C7orf50Q9BRJ6 194 aaKnown RBP1.34□□□□□ -2.19
LSM6-205ENST00000507449 MROQ9BYG7 248 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 PARVAQ9NVD7 372 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 PSORS1C2Q9UIG4 136 aa1.34□□□□□ -2.19
LSM6-205ENST00000507449 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.34□□□□□ -2.19
LSM6-205ENST00000507449 SLIT2O94813 1529 aa1.34□□□□□ -2.2
LSM6-205ENST00000507449 ATAD5Q96QE3 1844 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 RIMS2Q9UQ26 1411 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 CACNA1SQ13698 1873 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 TINCRA0A1B0GVN0 87 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 KNCNA6PVL3 124 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 MRASO14807 208 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 ZW10O43264 779 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 COCHO43405 550 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 CD99P14209 185 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 SLC25A16P16260 332 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 CFL1P23528 166 aaKnown RBP1.33□□□□□ -2.2
LSM6-205ENST00000507449 MIPP30301 263 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 HPCAP84074 193 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 ACSBG2Q5FVE4 666 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 DNM1P34Q6PK57 102 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 CD302Q8IX05 232 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 CCDC112Q8NEF3 446 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 OR10D3Q8NH80 312 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 SLC37A2Q8TED4 501 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 C16orf78Q8WTQ4 265 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.33□□□□□ -2.2
LSM6-205ENST00000507449 LLPHQ9BRT6 129 aaKnown RBP1.33□□□□□ -2.2
LSM6-205ENST00000507449 SLC22A4Q9H015 551 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 MS4A6AQ9H2W1 248 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 FAM206AQ9NX38 181 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 HHLA2Q9UM44 414 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 ALG5Q9Y673 324 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 BAHCC1Q9P281 2608 aa1.33□□□□□ -2.2
LSM6-205ENST00000507449 MUC21A0A0G2JKD1 596 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 MUC21A0A140T8X8 626 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 DHRS12A0PJE2 317 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 ITGB1BP1O14713 200 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 HPGDSO60760 199 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 CD7P09564 240 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 LINC00614P0C842 121 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 NPPCP23582 126 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 OR10J1P30954 320 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 DEFB103AP81534 67 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 FAM19A5Q7Z5A7 132 aaPredicted RBP1.32□□□□□ -2.2
LSM6-205ENST00000507449 C1orf174Q8IYL3 243 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 NATD1Q8N6N6 113 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 FNDC9Q8TBE3 224 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 TLCD1Q96CP7 247 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 NSRP1Q9H0G5 558 aaKnown RBP1.32□□□□□ -2.2
LSM6-205ENST00000507449 ADAMTS7Q9UKP4 1686 aa1.32□□□□□ -2.2
LSM6-205ENST00000507449 MDFIC2A0A1B0GVS7 189 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 COPEO14579 308 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 BIRC5O15392 142 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 TRAPPC3O43617 180 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 CRYBA1P05813 215 aa1.31□□□□□ -2.2
LSM6-205ENST00000507449 OCMP0CE72 109 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms