RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TRAV1-2A0A0B4J238 106 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 SHISA3A0PJX4 238 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 LDLRAD4O15165 306 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 YPEL1O60688 119 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 TMEM127O75204 238 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 MOSP00540 346 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 CALRP27797 417 aaKnown RBP11□□□□□ -0.65
PDLIM7-211ENST00000504318 PPP1CCP36873 323 aaKnown RBP11□□□□□ -0.65
PDLIM7-211ENST00000504318 TMEM50BP56557 158 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 GLT8D1Q68CQ7 371 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 OR2W3Q7Z3T1 314 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 PRR18Q8N4B5 295 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 RNF152Q8N8N0 203 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 OR2T10Q8NGZ9 312 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 CHPT1Q8WUD6 406 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 RITA1Q96K30 269 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 YPEL2Q96QA6 119 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 S1PR3Q99500 378 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 FAAP24Q9BTP7 215 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 TMEM59Q9BXS4 323 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 IFI27L2Q9H2X8 130 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 AKIP1Q9NQ31 210 aa11□□□□□ -0.65
PDLIM7-211ENST00000504318 SLC17A2O00624 439 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 TXNL1O43396 289 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 BPNT1O95861 308 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF45Q02386 682 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 PLA2G7Q13093 441 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 NKAPLQ5M9Q1 402 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF833PQ6ZTB9 187 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 SLC35E3Q7Z769 313 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 OR6M1Q8NGM8 313 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 KCNG3Q8TAE7 436 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 ACOT12Q8WYK0 555 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 KCTD12Q96CX2 325 aaKnown RBP10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 P2RX4Q99571 388 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 ABHD14AQ9BUJ0 271 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 PARP12Q9H0J9 701 aaKnown RBP10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 OR2S2Q9NQN1 319 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 NECAP2Q9NVZ3 263 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
PDLIM7-211ENST00000504318 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 PDCD5O14737 125 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 SOCS1O15524 211 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 IL3RAP26951 378 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 THBS3P49746 956 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 KRTAP10-11P60412 298 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 MXD1Q05195 221 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 SPANXN2Q5MJ10 180 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 MRPL41Q8IXM3 137 aaKnown RBP10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 RAB9BQ9NP90 201 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 ADAM30Q9UKF2 790 aa10.98□□□□□ -0.65
PDLIM7-211ENST00000504318 SAA2-SAA4A0A096LPE2 208 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 PROP1O75360 226 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 SAA2P0DJI9 122 aaPredicted RBP10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 PF4V1P10720 104 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 CD33P20138 364 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 CNTFRP26992 372 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 CD40LGP29965 261 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 ETV6P41212 452 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 OR3A3P47888 321 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 EGFEM1PQ0D2K5 195 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 P2RY14Q15391 338 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 MFSD4AQ8N468 514 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 OR8H1Q8NGG4 311 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 MYOZ3Q8TDC0 251 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 AK3Q9UIJ7 227 aa10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
PDLIM7-211ENST00000504318 NCBP2LA6PVI3 153 aaKnown RBP10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 AP4M1O00189 453 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 RGS5O15539 181 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 IGF1P05019 195 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 BLVRBP30043 206 aaPredicted RBP10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 KIAA0141Q14154 515 aaPredicted RBP10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 PLAC9Q5JTB6 97 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 C8orf86Q6ZUL3 223 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 COMMD1Q8N668 190 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 GALMQ96C23 342 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 RCC1LQ96I51 464 aaKnown RBP10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 ZFP57Q9NU63 452 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 KCNIP1Q9NZI2 227 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF107Q9UII5 783 aaPredicted RBP10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 HSF4Q9ULV5 492 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 KCNK7Q9Y2U2 307 aa10.96□□□□□ -0.65
PDLIM7-211ENST00000504318 IGKV1-6A0A0C4DH72 117 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 NOTOA8MTQ0 251 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 K7EIL1 84 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 ITGB1BP1O14713 200 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 NDUFA3O95167 84 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 IGHG4P01861 327 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 PF4P02776 101 aa10.95□□□□□ -0.66
PDLIM7-211ENST00000504318 RPLP1P05386 114 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms