RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZW10O43264 779 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 GNRH2O43555 120 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 CYTH3O43739 400 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 MPZL2O60487 215 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 TNFAIP8O95379 198 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 FADS2O95864 444 aaKnown RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 ASS1P00966 412 aaKnown RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 CRYBB3P26998 211 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 OR1E2P47887 323 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 SERPINB10P48595 397 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 HINT1P49773 126 aaPredicted RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 DAPP51397 102 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 OR4D1Q15615 310 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 TMEM249Q2WGJ8 235 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 Q3ZCU0 254 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 TTC33Q6PID6 262 aaPredicted RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 PLCZ1Q86YW0 608 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 FNDC9Q8TBE3 224 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 CCDC124Q96CT7 223 aaKnown RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 ABHD14BQ96IU4 210 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 DNAJC12Q9UKB3 198 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 SNX12Q9UMY4 172 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 DNMT1P26358 1616 aaKnown RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 KIAA0232Q92628 1395 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 DENND4BO75064 1496 aaPredicted RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 TRPM6Q9BX84 2022 aa0.65□□□□□ -2.3
SMC4-227ENST00000497984 OR5K4A6NMS3 321 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 A8MUN3 132 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 UGT2B11O75310 529 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 IGLV3-27P01718 113 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 APOA1P02647 267 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 OR13C7P0DN81 318 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 NPPCP23582 126 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 RELAQ04206 551 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 Q6ZTI0 123 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 COPS6Q7L5N1 327 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 LHFPL5Q8TAF8 219 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 DYNC2LI1Q8TCX1 351 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 RNASEH2CQ8TDP1 164 aaKnown RBP0.65□□□□□ -2.31
SMC4-227ENST00000497984 C10orf105Q8TEF2 133 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 TNFAIP8L1Q8WVP5 186 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 ZNF75CPQ92670 426 aaPredicted RBP0.65□□□□□ -2.31
SMC4-227ENST00000497984 SPZ1Q9BXG8 430 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 UGT2B28Q9BY64 529 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 GNB1LQ9BYB4 327 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 HHLA2Q9UM44 414 aa0.65□□□□□ -2.31
SMC4-227ENST00000497984 PUS1Q9Y606 427 aaKnown RBP eCLIP0.65□□□□□ -2.31
SMC4-227ENST00000497984 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 GOLGA8QA0A0J9YX86 632 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 GRIFINA4D1Z8 144 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 TMEM235A6NFC5 223 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 SYNGR1O43759 233 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 S100A9P06702 114 aaKnown RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 CD7P09564 240 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 ZNF728P0DKX0 622 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 ADORA1P30542 326 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 G6PCP35575 357 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 HSPA9P38646 679 aaKnown RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 RPL14P50914 215 aaKnown RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 DLX6P56179 175 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 ZNF90Q03938 601 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 C1DQ13901 141 aaKnown RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 UAP1Q16222 522 aaPredicted RBP0.64□□□□□ -2.31
SMC4-227ENST00000497984 MESTQ5EB52 335 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 FBXO48Q5FWF7 155 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 TMEM31Q5JXX7 168 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 SPATA31B1PQ5VZV4 182 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 COA5Q86WW8 74 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 CCDC112Q8NEF3 446 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 ACY3Q96HD9 319 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 CYTH2Q99418 400 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 OR51B6Q9H340 312 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 STK38LQ9Y2H1 464 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 FAM215AQ9Y5M1 114 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 SNX10Q9Y5X0 201 aa0.64□□□□□ -2.31
SMC4-227ENST00000497984 TMSB15BA0A087X1C1 80 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 ZNF705FA8MVS1 300 aaPredicted RBP0.63□□□□□ -2.31
SMC4-227ENST00000497984 OR11H12B2RN74 326 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 F5H5K5 113 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 SLC17A3O00476 420 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 STK16O75716 305 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 CRYBA1P05813 215 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 SYT1P21579 422 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 ATP6V0CP27449 155 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 MAGEA12P43365 314 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 XCL1P47992 114 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 RAP1GDS1P52306 607 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 RAB8AP61006 207 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 TBC1D28Q2M2D7 210 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 RBM48Q5RL73 367 aaKnown RBP0.63□□□□□ -2.31
SMC4-227ENST00000497984 AADACL4Q5VUY2 407 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 CNEP1R1Q8N9A8 125 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 OR11H2Q8NH07 326 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 OR51H1Q8NH63 302 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 RNF133Q8WVZ7 376 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 ZNF532Q9HCE3 1301 aa0.63□□□□□ -2.31
SMC4-227ENST00000497984 RFPL4AA6NLU0 287 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 C2orf74A8MZ97 194 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms