RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 LANCL1O43813 399 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 DIRAS3O95661 229 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 LPLP06858 475 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 DTYMKP23919 212 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 TALDO1P37837 337 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 SRSF7Q16629 238 aaKnown RBP eCLIP8.98□□□□□ -0.97
ERCC8-208ENST00000497892 ZNF260Q3ZCT1 412 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 CDNFQ49AH0 187 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 GPR107Q5VW38 600 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 C11orf88Q6PI97 169 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 GPR141Q7Z602 305 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 TGIF2LXQ8IUE1 241 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 DTX3Q8N9I9 347 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 OR2T6Q8NHC8 308 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 CAPSLQ8WWF8 208 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 SLC25A33Q9BSK2 321 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 CABLES2Q9BTV7 478 aa8.98□□□□□ -0.97
ERCC8-208ENST00000497892 NAA50Q9GZZ1 169 aaKnown RBP8.98□□□□□ -0.97
ERCC8-208ENST00000497892 PARP12Q9H0J9 701 aaKnown RBP8.98□□□□□ -0.97
ERCC8-208ENST00000497892 ZNF230Q9UIE0 474 aaPredicted RBP8.98□□□□□ -0.97
ERCC8-208ENST00000497892 ELF5Q9UKW6 265 aaPredicted RBP8.98□□□□□ -0.97
ERCC8-208ENST00000497892 SAA2-SAA4A0A096LPE2 208 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 TMEM235A6NFC5 223 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 HSPA12AO43301 675 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 IGKV1D-33P01593 117 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 IGKV1-33P01594 117 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 SAA2P0DJI9 122 aaPredicted RBP8.97□□□□□ -0.97
ERCC8-208ENST00000497892 PITPNAQ00169 270 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 EBI3Q14213 229 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 PNLIPRP3Q17RR3 467 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 UBE2NLQ5JXB2 153 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 FAM71F2Q6NXP2 309 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 ZNF833PQ6ZTB9 187 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 MOB3BQ86TA1 216 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 SAMD12Q8N8I0 201 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 NUDCD2Q8WVJ2 157 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 MAFIPQ8WZ33 124 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 AGMATQ9BSE5 352 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 PRSS22Q9GZN4 317 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 ABCG5Q9H222 651 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 MOB4Q9Y3A3 225 aa8.97□□□□□ -0.97
ERCC8-208ENST00000497892 TRAV18A0A075B6X5 111 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 IGKV1D-8A0A087WSZ0 117 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 TRBV6-7A0A0A0MS04 114 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 M0QZK8 103 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 SSX5O60225 188 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 AMY1AP04745 511 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 AMY2AP04746 511 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 GSTT2P0CG29 244 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 GSTT2BP0CG30 244 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 TMEM11P17152 192 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 CD1BP29016 333 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 CEACAM6P40199 344 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 OR3A3P47888 321 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 GNG2P59768 71 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 BLCAPP62952 87 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 LSAMPQ13449 338 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 HES1Q14469 280 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 IGSF11Q5DX21 431 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 Q8N6K4 173 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 CITED1Q99966 193 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 ZNF251Q9BRH9 671 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 TOLLIPQ9H0E2 274 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 C11orf54Q9H0W9 315 aaPredicted RBP8.96□□□□□ -0.98
ERCC8-208ENST00000497892 DCSTAMPQ9H295 470 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 GHITMQ9H3K2 345 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 DIABLOQ9NR28 239 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 SERTAD4Q9NUC0 356 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 RDH8Q9NYR8 311 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 PIPOXQ9P0Z9 390 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 FBN3Q75N90 2809 aa8.96□□□□□ -0.98
ERCC8-208ENST00000497892 IGHV3-72A0A0B4J1Y9 119 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 ZNF736B4DX44 427 aaPredicted RBP8.95□□□□□ -0.98
ERCC8-208ENST00000497892 RAB29O14966 203 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 BET1O15155 118 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 FGF16O43320 207 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 KRTAP10-3P60369 221 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 SRSF4Q08170 494 aaKnown RBP8.95□□□□□ -0.98
ERCC8-208ENST00000497892 C5orf56Q8N8D9 126 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 OR2T10Q8NGZ9 312 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 OR10J5Q8NHC4 309 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 ACOT12Q8WYK0 555 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 S100A16Q96FQ6 103 aaKnown RBP8.95□□□□□ -0.98
ERCC8-208ENST00000497892 ABHD14BQ96IU4 210 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 EAF1Q96JC9 268 aaPredicted RBP8.95□□□□□ -0.98
ERCC8-208ENST00000497892 NABP2Q9BQ15 211 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 MRPL20Q9BYC9 149 aaKnown RBP8.95□□□□□ -0.98
ERCC8-208ENST00000497892 AUNIPQ9H7T9 357 aa8.95□□□□□ -0.98
ERCC8-208ENST00000497892 XRCC3O43542 346 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 MOSP00540 346 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 RPL5P46777 297 aaKnown RBP8.94□□□□□ -0.98
ERCC8-208ENST00000497892 RORCP51449 518 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 HNF4GQ14541 408 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 TMEM95Q3KNT9 176 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 ABCA11PQ4W5N1 156 aa8.94□□□□□ -0.98
ERCC8-208ENST00000497892 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms