RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TMEM235A6NFC5 223 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 C11orf86A6NJI1 115 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 C2orf74A8MZ97 194 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 PET100P0DJ07 73 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 OR13C7P0DN81 318 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 CRHBPP24387 322 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 CDK2P24941 298 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 PEBP1P30086 187 aaKnown RBP1.2□□□□□ -2.22
PSPC1-205ENST00000497722 KDELR2P33947 212 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 RAP1GDS1P52306 607 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 TSPEAR-AS2P59090 65 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 HES1Q14469 280 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 CLEC12BQ2HXU8 276 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 LGALS9CQ6DKI2 356 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 AMTNQ6UX39 209 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 C17orf78Q8N4C9 275 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 LHFPL5Q8TAF8 219 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 FNDC9Q8TBE3 224 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 TNFAIP8L1Q8WVP5 186 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 TMBIM1Q969X1 311 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 TBX5Q99593 518 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 ACBD6Q9BR61 282 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 NDEL1Q9GZM8 345 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 CXCL16Q9H2A7 254 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 CHMP4BQ9H444 224 aaKnown RBP1.2□□□□□ -2.22
PSPC1-205ENST00000497722 HHLA2Q9UM44 414 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 COL18A1P39060 1754 aa1.2□□□□□ -2.22
PSPC1-205ENST00000497722 PXDNLA1KZ92 1463 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 IGLV3-9A0A075B6K5 115 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 F8VZ95 297 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 TXNDC9O14530 226 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 COPEO14579 308 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 GSTZ1O43708 216 aaPredicted RBP1.19□□□□□ -2.22
PSPC1-205ENST00000497722 CD7P09564 240 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 RD3LP0DJH9 198 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 NPPCP23582 126 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 CRATP43155 626 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 SERPINB10P48595 397 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 DAD1P61803 113 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 SS18Q15532 418 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 ZNHIT3Q15649 155 aaPredicted RBP1.19□□□□□ -2.22
PSPC1-205ENST00000497722 TBC1D28Q2M2D7 210 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 COPS6Q7L5N1 327 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 ATP5L2Q7Z4Y8 100 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 HBEGFQ99075 208 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 SPZ1Q9BXG8 430 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 MRPS16Q9Y3D3 137 aaKnown RBP1.19□□□□□ -2.22
PSPC1-205ENST00000497722 SLIT2O94813 1529 aa1.19□□□□□ -2.22
PSPC1-205ENST00000497722 RTEL1-TNFRSF6BF6WH68 1400 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 A0A0G2JQZ4 141 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 GNRH2O43555 120 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 NEMFO60524 1076 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 GP1BAP07359 652 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 CA7P43166 264 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 STC1P52823 247 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 BTN3A2P78410 334 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 SLC35E3Q7Z769 313 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 DEFB119Q8N690 84 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 ZNF283Q8N7M2 679 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 OR2D3Q8NGH3 330 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 OR5J2Q8NH18 312 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 TLCD1Q96CP7 247 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 ACY3Q96HD9 319 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 ZNF625Q96I27 306 aaPredicted RBP1.18□□□□□ -2.22
PSPC1-205ENST00000497722 RBP7Q96R05 134 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 OR7D2Q96RA2 312 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 Q9BRP9 147 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 UPK3BQ9BT76 320 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 SLC2A9Q9NRM0 540 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 UBQLN4Q9NRR5 601 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 C1orf109Q9NX04 203 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 MS4A12Q9NXJ0 267 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 MPDZO75970 2070 aa1.18□□□□□ -2.22
PSPC1-205ENST00000497722 LRPPRCP42704 1394 aaKnown RBP1.18□□□□□ -2.22
PSPC1-205ENST00000497722 SYNRGQ9UMZ2 1314 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 TRAV8-1A0A0A6YYK1 113 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 A0A1B0GVG6 124 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 METTL15A6NJ78 407 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 RFPL4AA6NLU0 287 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 OR11H12B2RN74 326 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 RFPL4AL1F8VTS6 287 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 SLC17A3O00476 420 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 MRASO14807 208 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 STX10O60499 249 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 IGHV1-69P01742 117 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 CRYBA1P05813 215 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 LINC00614P0C842 121 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 GRPRP30550 384 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 OPRM1P35372 400 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 HADHBP55084 474 aaKnown RBP1.17□□□□□ -2.22
PSPC1-205ENST00000497722 TMEM258P61165 79 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 ZNF90Q03938 601 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 SMAGPQ0VAQ4 97 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 KRTAP21-3Q3LHN1 58 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 PABPC1L2AQ5JQF8 200 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 C2orf91Q6ZV80 131 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 LHFPL1Q86WI0 220 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 PLCZ1Q86YW0 608 aa1.17□□□□□ -2.22
PSPC1-205ENST00000497722 BAP18Q8IXM2 172 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms