RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 LYPD2Q6UXB3 125 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 YPEL2Q96QA6 119 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 GSX2Q9BZM3 304 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 PLEKHF2Q9H8W4 249 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 LINC00574Q9H8X3 128 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 RCL1Q9Y2P8 373 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 NKX6-3A6NJ46 265 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 ST8SIA3O43173 380 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 LINC00205P59089 165 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 IZUMO4Q1ZYL8 232 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 CLLU1Q5K131 121 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 Q6ZRM9 215 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 CORO2AQ92828 525 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 POMT1Q9Y6A1 747 aa11.31□□□□□ -0.6
SPTBN1-205ENST00000496323 DYSFO75923 2080 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 RAMP3O60896 148 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 NDUFB7P17568 137 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 SCARB1Q8WTV0 552 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 SPIN2AQ99865 258 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 SPIN2BQ9BPZ2 258 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 C19orf12Q9NSK7 152 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 DSCAMO60469 2012 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 CFAP46Q8IYW2 2715 aa11.3□□□□□ -0.6
SPTBN1-205ENST00000496323 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 RNF212BA8MTL3 300 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 E5RGE8 158 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 SLC31A2O15432 143 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 PITX3O75364 302 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 MMP23AO75900 390 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 AGAP20933 346 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 COL8A2P25067 703 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 NUP62P37198 522 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 ID3Q02535 119 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 ZFP57Q9NU63 452 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 CTSZQ9UBR2 303 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 NSG2Q9Y328 171 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 ACACBO00763 2458 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 LINC00473A8K010 186 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 PPOXP50336 477 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 Q3ZCU0 254 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 OR2B11Q5JQS5 317 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 IFI27L2Q9H2X8 130 aa11.29□□□□□ -0.6
SPTBN1-205ENST00000496323 LINC00862A6NCI5 91 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 ZNF729A6NN14 1252 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 C17orf98A8MV24 154 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 KIAA1324LA8MWY0 1029 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 EPHA1P21709 976 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 LPAR6P43657 344 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 ZNF273Q14593 569 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 HFEQ30201 348 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 THOC7Q6I9Y2 204 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 C1orf229Q6ZS94 237 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 BSCL2Q96G97 398 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 A0A1B0GU03 582 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 hADV38S2A0JD32 116 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 NXPH3O95157 252 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 CLDN1O95832 211 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 SOD3P08294 240 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 NMBP08949 121 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 SLC25A6P12236 298 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 GPR12P47775 334 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 CLEC9AQ6UXN8 241 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 LINC00312Q9Y6C7 94 aa11.28□□□□□ -0.6
SPTBN1-205ENST00000496323 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.6
SPTBN1-205ENST00000496323 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms