RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RHEBQ15382 184 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 SOHLH1Q5JUK2 328 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF66Q6ZN08 573 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF808Q8N4W9 903 aaPredicted RBP9.28□□□□□ -0.92
CMSS1-208ENST00000496116 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 SFT2D1Q8WV19 159 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 TCTEX1D2Q8WW35 142 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 MUCL1Q96DR8 90 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
CMSS1-208ENST00000496116 DUSP13Q9UII6 198 aa9.28□□□□□ -0.92
CMSS1-208ENST00000496116 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 SRRM5B3KS81 715 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 M0R1B8 84 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 RAMP3O60896 148 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 OR13C7P0DN81 318 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 SSTR5P35346 364 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF83P51522 516 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 HTD2P86397 168 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
CMSS1-208ENST00000496116 TNFRSF9Q07011 255 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF816Q0VGE8 651 aaPredicted RBP9.27□□□□□ -0.93
CMSS1-208ENST00000496116 EIF4EBP1Q13541 118 aaPredicted RBP9.27□□□□□ -0.93
CMSS1-208ENST00000496116 C3orf36Q3SXR2 165 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 SPANXN5Q5MJ07 72 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 OR13A1Q8NGR1 328 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 S100PBPQ96BU1 408 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 RARRES2Q99969 163 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 ESRP2Q9H6T0 727 aaKnown RBP9.27□□□□□ -0.93
CMSS1-208ENST00000496116 TUBA4BQ9H853 241 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
CMSS1-208ENST00000496116 COLCA2A8K830 154 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 NDUFA2O43678 99 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CLDN1O95832 211 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 KRASP01116 189 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 G6PCP35575 357 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 TIMP3P35625 211 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 RAB13P51153 203 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CCL20P78556 96 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 SERF2P84101 59 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 C1orf185Q5T7R7 199 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 ALKBH2Q6NS38 261 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CD177Q8N6Q3 437 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF525Q8N782 197 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 TPRX1Q8N7U7 411 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 FAM216AQ8WUB2 273 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 C14orf79Q96F83 325 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 HSD17B10Q99714 261 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 PARD6GQ9BYG4 376 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 HSPB7Q9UBY9 170 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 MEX3AA1L020 520 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 LRRC30A6NM36 301 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 IGHV3-13P01766 116 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 HSPB1P04792 205 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CRYBA1P05813 215 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 GZMHP20718 246 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 GLRXP35754 106 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CFHR2P36980 270 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 KLF3P57682 345 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 RPL30P62888 115 aaKnown RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 LRRC75BQ2VPJ9 315 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 OR2B11Q5JQS5 317 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF474Q6S9Z5 364 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 ETV3LQ6ZN32 361 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 CLCC1Q96S66 551 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 RBKSQ9H477 322 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 SEBOXQ9HB31 216 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-208ENST00000496116 FAM215AQ9Y5M1 114 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 SVILO95425 2214 aa9.26□□□□□ -0.93
CMSS1-208ENST00000496116 PRR14LQ5THK1 2151 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 TRAV1-1A0A0B4J248 108 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RAB29O14966 203 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 ZNF737O75373 536 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 S1PR2O95136 353 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 CLDN14O95500 239 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 TFF1P04155 84 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 FOLR2P14207 255 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 TCF15Q12870 199 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 EDDM3AQ14507 147 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 HAGHQ16775 308 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SP5Q6BEB4 398 aaPredicted RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 BTNL3Q6UXE8 466 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 H2BFWTQ7Z2G1 175 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 C5orf30Q96GV9 206 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SNX22Q96L94 193 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 RSG1Q9BU20 258 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 C20orf24Q9BUV8 137 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SFXN3Q9BWM7 321 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 CHD3Q12873 2000 aaKnown RBP9.25□□□□□ -0.93
CMSS1-208ENST00000496116 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 CACNA1DQ01668 2161 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 IGHV3-43A0A0B4J1X8 118 aa9.25□□□□□ -0.93
CMSS1-208ENST00000496116 ODAMA1E959 279 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms