RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IL4I1Q96RQ9 567 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 CNN2Q99439 309 aaKnown RBP4.01□□□□□ -1.77
PTCD3-219ENST00000494323 GPR61Q9BZJ8 451 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 SRD5A3Q9H8P0 318 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 PLEKHA1Q9HB21 404 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 GSN-AS1Q9NRJ2 163 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 PTTG2Q9NZH5 202 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 GLS2Q9UI32 602 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 GPR132Q9UNW8 380 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 TMEM14AQ9Y6G1 99 aa4.01□□□□□ -1.77
PTCD3-219ENST00000494323 IGHV3-72A0A0B4J1Y9 119 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 TRAV39A0A0B4J263 110 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 IGKV1-9A0A0C4DH69 117 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 IGKV1-12A0A0C4DH73 117 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 TRBV2A0A0J9YWF9 115 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 A0A1W2PQL4 384 aaPredicted RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 ODAMA1E959 279 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 NCBP2LA6PVI3 153 aaKnown RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 SEC14L6B5MCN3 397 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF670-ZNF695F2Z2N8 137 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 DEGS1O15121 323 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CTDSPLO15194 276 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CYB5AP00167 134 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 IGKV1D-33P01593 117 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 IGKV1-33P01594 117 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 IGKV1D-12P01611 117 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 KRT8P05787 483 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ANXA8P13928 327 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF44P15621 663 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CCL1P22362 96 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 EPHA2P29317 976 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ERP29P30040 261 aaKnown RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 RBP2P50120 134 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 DAPP51397 102 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SLC35B1P78383 322 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 GABPB1Q06547 395 aaPredicted RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 PDZK1IP1Q13113 114 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ZNF146Q15072 292 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 LTC4SQ16873 150 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 FAM53AQ6NSI3 398 aaPredicted RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 Q6ZSR3 168 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SLC35E3Q7Z769 313 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 NFE4Q86UQ8 179 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CATSPERDQ86XM0 798 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SBSPONQ8IVN8 264 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ENTHD1Q8IYW4 607 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 PRSS35Q8N3Z0 413 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 STPG2Q8N412 459 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 C5orf56Q8N8D9 126 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 DMBX1Q8NFW5 382 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 OR5D18Q8NGL1 313 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 OR13A1Q8NGR1 328 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 MUC7Q8TAX7 377 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 RPEQ96AT9 228 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CREB3L1Q96BA8 519 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 FGGYQ96C11 551 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CCDC124Q96CT7 223 aaKnown RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 ADAT3Q96EY9 351 aaPredicted RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 NSL1Q96IY1 281 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SPACA5Q96QH8 159 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 CHST5Q9GZS9 411 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SLC5A7Q9GZV3 580 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 GAL3ST2Q9H3Q3 398 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ADGRL4Q9HBW9 690 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 SLC25A19Q9HC21 320 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 HMG20AQ9NP66 347 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 RAB9BQ9NP90 201 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 EXOSC4Q9NPD3 245 aaKnown RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 CLN6Q9NWW5 311 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 NDE1Q9NXR1 346 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 TAS2R3Q9NYW6 316 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 ZMAT5Q9UDW3 170 aaKnown RBP4□□□□□ -1.77
PTCD3-219ENST00000494323 PSG11Q9UQ72 335 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 MOB4Q9Y3A3 225 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 HSPE1-MOB4S4R3N1 261 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 TNCP24821 2201 aa4□□□□□ -1.77
PTCD3-219ENST00000494323 KBTBD11-OT1A0A1B0GTJ5 212 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 FUOMA2VDF0 154 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 METTL15A6NJ78 407 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 DHRS7CA6NNS2 312 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 GATBO75879 557 aaKnown RBP3.99□□□□□ -1.77
PTCD3-219ENST00000494323 IGHG2P01859 326 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 CGB3P0DN86 165 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 CGB7P0DN87 165 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 ATF1P18846 271 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 CD34P28906 385 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 PTGFRP43088 359 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 REG1BP48304 166 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 GNG10P50151 68 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 MNAT1P51948 309 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 CDC42P60953 191 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 BNIP1Q12981 228 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 GK3PQ14409 553 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 KIR2DS1Q14954 304 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 ATXN7L3Q14CW9 347 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-219ENST00000494323 SPIN3Q5JUX0 258 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 C9orf66Q5T8R8 295 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 AADACL4Q5VUY2 407 aa3.99□□□□□ -1.77
PTCD3-219ENST00000494323 ZFAND6Q6FIF0 208 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms