RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TMEM94Q12767 1356 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 IGHV3-15A0A0B4J1V0 119 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 ERICH4A6NGS2 130 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 F8VZ95 297 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 H3BPC8 53 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 H3BRN7 92 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 TOX3O15405 576 aaPredicted RBP1.19□□□□□ -2.22
SMC4-223ENST00000493695 ASS1P00966 412 aaKnown RBP1.19□□□□□ -2.22
SMC4-223ENST00000493695 OR13C7P0DN81 318 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 GZMBP10144 247 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 CCL3P10147 92 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SLC25A16P16260 332 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SULT1A2P50226 295 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 DAD1P61803 113 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 C1DQ13901 141 aaKnown RBP1.19□□□□□ -2.22
SMC4-223ENST00000493695 ZNHIT3Q15649 155 aaPredicted RBP1.19□□□□□ -2.22
SMC4-223ENST00000493695 MESTQ5EB52 335 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SPATA31B1PQ5VZV4 182 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SCGB1D4Q6XE38 83 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SPATA24Q86W54 205 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 BLIDQ8IZY5 108 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SYCE1Q8N0S2 351 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 OR5L1Q8NGL2 311 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 LRRC45Q96CN5 670 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SMIM12Q96EX1 92 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 ABHD14BQ96IU4 210 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 MBOAT7Q96N66 472 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 MND1Q9BWT6 205 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 SNX10Q9Y5X0 201 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 ALG5Q9Y673 324 aa1.19□□□□□ -2.22
SMC4-223ENST00000493695 RIMS2Q9UQ26 1411 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 SLX4Q8IY92 1834 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 A0A0G2JQZ4 141 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 VPS37CA5D8V6 355 aaPredicted RBP1.18□□□□□ -2.22
SMC4-223ENST00000493695 SMLR1H3BR10 107 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 M0QX08 132 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 NDUFS6O75380 124 aaKnown RBP1.18□□□□□ -2.22
SMC4-223ENST00000493695 CRHBPP24387 322 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 CRYBB3P26998 211 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 PPP1CCP36873 323 aaKnown RBP1.18□□□□□ -2.22
SMC4-223ENST00000493695 ACTBP60709 375 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 ACTG1P63261 375 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 TMED1Q13445 227 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.18□□□□□ -2.22
SMC4-223ENST00000493695 CRLF3Q8IUI8 442 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 BOD1L2Q8IYS8 172 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 TRNT1Q96Q11 434 aaKnown RBP1.18□□□□□ -2.22
SMC4-223ENST00000493695 OR7D2Q96RA2 312 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 GPR22Q99680 433 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 GLS2Q9UI32 602 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 FAM215AQ9Y5M1 114 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 THSD7AQ9UPZ6 1657 aa1.18□□□□□ -2.22
SMC4-223ENST00000493695 RAD50Q92878 1312 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 ARHGAP32A7KAX9 2087 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 GRIFINA4D1Z8 144 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 SLC17A3O00476 420 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 STK16O75716 305 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 ARL6IP5O75915 188 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 ORM1P02763 201 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 CD36P16671 472 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 PVALBP20472 110 aaPredicted RBP1.17□□□□□ -2.22
SMC4-223ENST00000493695 H2BFSP57053 126 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 SNAP25P60880 206 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 PMS2P3Q13401 168 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 C4orf26Q17RF5 130 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 TBC1D28Q2M2D7 210 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 LCN8Q6JVE9 175 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 LFNGQ8NES3 379 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 PECRQ9BY49 303 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 DNAJC12Q9UKB3 198 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 PSMD13Q9UNM6 376 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 TP53TG1Q9Y2A0 90 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
SMC4-223ENST00000493695 REREQ9P2R6 1566 aa1.17□□□□□ -2.22
SMC4-223ENST00000493695 KDM5BQ9UGL1 1544 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 TMEM235A6NFC5 223 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 OR5K4A6NMS3 321 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 FTCDNL1E5RQL4 147 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 FNDC10F2Z333 226 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 UBFD1O14562 309 aaKnown RBP1.16□□□□□ -2.22
SMC4-223ENST00000493695 ZW10O43264 779 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 GNRH2O43555 120 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 NPPAP01160 153 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 HBZP02008 142 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 CRYBA1P05813 215 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 RD3LP0DJH9 198 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 CFL1P23528 166 aaKnown RBP1.16□□□□□ -2.22
SMC4-223ENST00000493695 PSMB6P28072 239 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 MIPP30301 263 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 ADORA1P30542 326 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 CD200P41217 278 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 TMEM267Q0VDI3 215 aaPredicted RBP1.16□□□□□ -2.22
SMC4-223ENST00000493695 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 NATD1Q8N6N6 113 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 ZNF283Q8N7M2 679 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 PPCDCQ96CD2 204 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 MGLLQ99685 303 aa1.16□□□□□ -2.22
SMC4-223ENST00000493695 NKX6-2Q9C056 277 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms