RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 PSMA1P25786 263 aaKnown RBP8.39□□□□□ -1.07
COL6A3-214ENST00000493608 OR10A3P58181 314 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 LSAMPQ13449 338 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 TBCEQ15813 527 aaPredicted RBP8.39□□□□□ -1.07
COL6A3-214ENST00000493608 KPRPQ5T749 579 aaPredicted RBP8.39□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF880Q6PDB4 577 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 OR2W3Q7Z3T1 314 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF554Q86TJ5 538 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 FOXRED2Q8IWF2 684 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 FAM89BQ8N5H3 189 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 OR2AK2Q8NG84 335 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 FAM3DQ96BQ1 224 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 YPEL2Q96QA6 119 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 NABP2Q9BQ15 211 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 PECRQ9BY49 303 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 PARP12Q9H0J9 701 aaKnown RBP8.39□□□□□ -1.07
COL6A3-214ENST00000493608 LIN7CQ9NUP9 197 aaKnown RBP8.39□□□□□ -1.07
COL6A3-214ENST00000493608 BLOC1S6Q9UL45 172 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 LRRC42Q9Y546 428 aa8.39□□□□□ -1.07
COL6A3-214ENST00000493608 SAA2-SAA4A0A096LPE2 208 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 A0A0B4J203 849 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 TMEM272A0A1B0GTI8 110 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 SMIM30A4D0T7 59 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 FOXI3A8MTJ6 420 aaPredicted RBP8.38□□□□□ -1.07
COL6A3-214ENST00000493608 NUDT19A8MXV4 375 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 TXNL1O43396 289 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 DENRO43583 198 aaKnown RBP8.38□□□□□ -1.07
COL6A3-214ENST00000493608 SCTP09683 121 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 SAA2P0DJI9 122 aaPredicted RBP8.38□□□□□ -1.07
COL6A3-214ENST00000493608 RPL23AP62750 156 aaKnown RBP8.38□□□□□ -1.07
COL6A3-214ENST00000493608 SLC35B1P78383 322 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 MMDQ15546 238 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 RPL39P5Q59GN2 51 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 PLAC9Q5JTB6 97 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 FOXB2Q5VYV0 432 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 GLDNQ6ZMI3 551 aaPredicted RBP8.38□□□□□ -1.07
COL6A3-214ENST00000493608 FAM71E2Q8N5Q1 922 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 MISP3Q96FF7 219 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 ABHD14BQ96IU4 210 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 DUX3Q96PT4 197 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 OR1A1Q9P1Q5 309 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 STEAP1Q9UHE8 339 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 SLC23A1Q9UHI7 598 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
COL6A3-214ENST00000493608 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 AP4M1O00189 453 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 PDCD5O14737 125 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 LDLRAD4O15165 306 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 SOX6P35712 828 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 CEACAM6P40199 344 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 ACTBP60709 375 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 HLA-DRB3P79483 266 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 MOGAT2Q3SYC2 334 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 C22orf42Q6IC83 251 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 ETV3LQ6ZN32 361 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF833PQ6ZTB9 187 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 KLHL30-AS1Q8NEE0 82 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 CMSS1Q9BQ75 279 aaKnown RBP8.37□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF251Q9BRH9 671 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 IFI27L2Q9H2X8 130 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 RIMS4Q9H426 269 aaPredicted RBP8.37□□□□□ -1.07
COL6A3-214ENST00000493608 Q9N2K0 584 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 RAB22AQ9UL26 194 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 HSF4Q9ULV5 492 aa8.37□□□□□ -1.07
COL6A3-214ENST00000493608 A0A075B6Q4 140 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 TRBV6-6A0A0A6YYG2 114 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 TRAV1-2A0A0B4J238 106 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 TRDV1A0A1B0GX56 115 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 HSPA12AO43301 675 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 CD3GP09693 182 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 CT45A6P0DMU7 189 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 CT45A5P0DMU8 189 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 CT45A7P0DMV0 189 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 GNB3P16520 340 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 MYL9P24844 172 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 PSMB9P28065 219 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 THBS3P49746 956 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 PSMD7P51665 324 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 PNLIPRP3Q17RR3 467 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 LY6G6FQ5SQ64 297 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 TEX38Q6PEX7 206 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 FAM131AQ6UXB0 335 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 MRPL41Q8IXM3 137 aaKnown RBP8.36□□□□□ -1.07
COL6A3-214ENST00000493608 SPARTQ8N0X7 666 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 DRAXINQ8NBI3 349 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-214ENST00000493608 OR8H1Q8NGG4 311 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 OR56B1Q8NGI3 324 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 MAFIPQ8WZ33 124 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 C11orf54Q9H0W9 315 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-214ENST00000493608 NECAP2Q9NVZ3 263 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 AURKAIP1Q9NWT8 199 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-214ENST00000493608 NDUFB11Q9NX14 153 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF107Q9UII5 783 aaPredicted RBP8.36□□□□□ -1.07
COL6A3-214ENST00000493608 KCNK7Q9Y2U2 307 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 WSB1Q9Y6I7 421 aa8.36□□□□□ -1.07
COL6A3-214ENST00000493608 IGKV1-6A0A0C4DH72 117 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms