RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 OR6M1Q8NGM8 313 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 MYOZ3Q8TDC0 251 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 ABHD5Q8WTS1 349 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 UFD1Q92890 307 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 TMEM203Q969S6 136 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 WWC2-AS2Q96NR7 200 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 TM2D1Q9BX74 207 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 SCN3BQ9NY72 215 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 PIPOXQ9P0Z9 390 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 SLC23A1Q9UHI7 598 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 LSM2Q9Y333 95 aaKnown RBP16.33■□□□□ 0.2
SYNE4-205ENST00000490730 A3GALT2U3KPV4 340 aa16.33■□□□□ 0.2
SYNE4-205ENST00000490730 A0A0A6YYD4 124 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 RAB29O14966 203 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 SLC22A1O15245 554 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 LY86O95711 162 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 NAPSAO96009 420 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 GNB1P62873 340 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 ZNF616Q08AN1 781 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 FAM71F2Q6NXP2 309 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 MOB1BQ7L9L4 216 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 NPBQ8NG41 125 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 PARP12Q9H0J9 701 aaKnown RBP16.32■□□□□ 0.2
SYNE4-205ENST00000490730 FBXL15Q9H469 300 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 SCOCQ9UIL1 159 aa16.32■□□□□ 0.2
SYNE4-205ENST00000490730 TMEM14DPA8MWL7 114 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 ANKRD65E5RJM6 399 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 H7C2Y5 167 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 IGLV1-40P01703 118 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 UCHL1P09936 223 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 HSMCR30P0CW71 290 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 RAB9AP51151 201 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 QRFPP83859 136 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 NDPQ00604 133 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 KIAA0141Q14154 515 aaPredicted RBP16.31■□□□□ 0.2
SYNE4-205ENST00000490730 ABHD14BQ96IU4 210 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 HDHD3Q9BSH5 251 aaPredicted RBP16.31■□□□□ 0.2
SYNE4-205ENST00000490730 URM1Q9BTM9 101 aaKnown RBP16.31■□□□□ 0.2
SYNE4-205ENST00000490730 AK3Q9UIJ7 227 aa16.31■□□□□ 0.2
SYNE4-205ENST00000490730 A0A1W2PN81 502 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 I3L521 148 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 SOCS1O15524 211 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 HSPA12AO43301 675 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 NDUFA3O95167 84 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 GSTP1P09211 210 aaKnown RBP16.3■□□□□ 0.2
SYNE4-205ENST00000490730 CT45A6P0DMU7 189 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 CT45A5P0DMU8 189 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 CT45A7P0DMV0 189 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 ARSBP15848 533 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 CHRNA7P36544 502 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 ZNF880Q6PDB4 577 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 CASTOR1Q8WTX7 329 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 LPAR5Q9H1C0 372 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 RIMS4Q9H426 269 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-205ENST00000490730 OR1A1Q9P1Q5 309 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 ZNF256Q9Y2P7 627 aaPredicted RBP16.3■□□□□ 0.2
SYNE4-205ENST00000490730 FBXO7Q9Y3I1 522 aa16.3■□□□□ 0.2
SYNE4-205ENST00000490730 LSM4Q9Y4Z0 139 aaKnown RBP16.3■□□□□ 0.2
SYNE4-205ENST00000490730 OR5H14A6NHG9 310 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 RRHO14718 337 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
SYNE4-205ENST00000490730 HLA-DRB3P79483 266 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 ASPHD1Q5U4P2 390 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 MINDY2Q8NBR6 621 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 ALX4Q9H161 411 aaPredicted RBP16.29■□□□□ 0.2
SYNE4-205ENST00000490730 WASHC3Q9Y3C0 194 aa16.29■□□□□ 0.2
SYNE4-205ENST00000490730 H0YJW9 148 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 NHLRC4P0CG21 123 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-205ENST00000490730 ZBTB25P24278 435 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 CEACAM6P40199 344 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 CX3CL1P78423 397 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 RUNX1Q01196 453 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 RAB11BQ15907 218 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 ZNF660Q6AZW8 331 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-205ENST00000490730 CLCC1Q96S66 551 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 ASCL2Q99929 193 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 RNF150Q9ULK6 438 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 FOXA2Q9Y261 457 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-205ENST00000490730 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
SYNE4-205ENST00000490730 U3KQK5 164 aa16.28■□□□□ 0.2
SYNE4-205ENST00000490730 FCN1O00602 326 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 SLC17A2O00624 439 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 MC5RP33032 325 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 VEGFCP49767 419 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 AQP4P55087 323 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 IRF3Q14653 427 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 DRAXINQ8NBI3 349 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-205ENST00000490730 EDARADDQ8WWZ3 215 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 DCUN1D4Q92564 292 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 GFI1Q99684 422 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 CCDC90BQ9GZT6 254 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 C11orf54Q9H0W9 315 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-205ENST00000490730 ISYNA1Q9NPH2 558 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 C12orf4Q9NQ89 552 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 NKX1-2Q9UD57 310 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-205ENST00000490730 TPRKBQ9Y3C4 175 aa16.27■□□□□ 0.2
SYNE4-205ENST00000490730 TRBV6-6A0A0A6YYG2 114 aa16.26■□□□□ 0.19
SYNE4-205ENST00000490730 OVOL1O14753 267 aa16.26■□□□□ 0.19
SYNE4-205ENST00000490730 SOX15O60248 233 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms