RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 OR10J5Q8NHC4 309 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 ABHD14BQ96IU4 210 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 ANXA10Q9UJ72 324 aa11.51□□□□□ -0.57
SRGAP3-208ENST00000490348 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 LANCL1O43813 399 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 NDUFA7O95182 113 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 IL3RAP26951 378 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 BRS3P32247 399 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 FOXB2Q5VYV0 432 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 DHRS7BQ6IAN0 325 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 Q6ZSV7 163 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 TGIF2LXQ8IUE1 241 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 BEST4Q8NFU0 473 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 RNF150Q9ULK6 438 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 VWFP04275 2813 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 FAM25AB3EWG3 89 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 FAM25CB3EWG5 89 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 FAM25GB3EWG6 89 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 CRYBA1P05813 215 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 MDKP21741 143 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 RAG2P55895 527 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 THNSL2Q86YJ6 484 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 SNX29P2Q8IUI4 249 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 EDARADDQ8WWZ3 215 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 DCUN1D5Q9BTE7 237 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 EXTL2Q9UBQ6 330 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
SRGAP3-208ENST00000490348 DPPA5A6NC42 116 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 RAB29O14966 203 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 RGS5O15539 181 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 TSPAN9O75954 239 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 IGKV1D-33P01593 117 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 IGKV1-33P01594 117 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 AMY1AP04745 511 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 AMY2AP04746 511 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 PRSS3P35030 304 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 CNIH2Q6PI25 160 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 Q6ZS46 218 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 GPX8Q8TED1 209 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 RBM14Q96PK6 669 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 ABHD1Q96SE0 405 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 PIPOXQ9P0Z9 390 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 ADAM30Q9UKF2 790 aa11.49□□□□□ -0.57
SRGAP3-208ENST00000490348 PKD1L1Q8TDX9 2849 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 TXNL1O43396 289 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 LPLP06858 475 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 OR8U9P0C7N5 309 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 FAM106CPP0CH98 169 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 NFYAP23511 347 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 LINC00205P59089 165 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 BLCAPP62952 87 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 LSAMPQ13449 338 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 EBI3Q14213 229 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 HNF4GQ14541 408 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 Q8N6K4 173 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 OR8U1Q8NH10 309 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 LINC01006Q8NI28 216 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 C6orf62Q9GZU0 229 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 RAB18Q9NP72 206 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 SIGLEC9Q9Y336 463 aa11.48□□□□□ -0.57
SRGAP3-208ENST00000490348 OR2F2O95006 317 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 NAT1P18440 290 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 CD1BP29016 333 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 CBX5P45973 191 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 FOXL1Q12952 345 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 LYSMD2Q8IV50 215 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 SPATA3Q8NHX4 192 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 SLC25A33Q9BSK2 321 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 OR2D2Q9H210 308 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 C16orf95Q9H693 158 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 ZNF702PQ9H963 129 aa11.47□□□□□ -0.57
SRGAP3-208ENST00000490348 IGKV1D-13A0A0B4J2D9 117 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 TUSC2O75896 110 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 CTXN2P0C2S0 81 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 IGKV1-13P0DP09 117 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 GPR12P47775 334 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 ARPC4P59998 168 aa11.46□□□□□ -0.57
SRGAP3-208ENST00000490348 HES1Q14469 280 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms