RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LSAMPQ13449 338 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 NSUN5P1Q3KNT7 163 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 OR10J5Q8NHC4 309 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 MAFIPQ8WZ33 124 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 ABHD14BQ96IU4 210 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
CCL28-202ENST00000489442 C11orf54Q9H0W9 315 aaPredicted RBP10.63□□□□□ -0.71
CCL28-202ENST00000489442 IFI27L2Q9H2X8 130 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 RHBDL2Q9NX52 303 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 ZNF230Q9UIE0 474 aaPredicted RBP10.63□□□□□ -0.71
CCL28-202ENST00000489442 ZNF221Q9UK13 617 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 CMYA5Q8N3K9 4069 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 ITGB1BP1O14713 200 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 TSPAN15O95858 294 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 SCAND1P57086 179 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 ZNF833PQ6ZTB9 187 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 SLC35E3Q7Z769 313 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 CROCCP3Q8IVE0 287 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 FOXRED2Q8IWF2 684 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 Q8N6K4 173 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 YIPF6Q96EC8 236 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 CITED2Q99967 270 aaPredicted RBP10.62□□□□□ -0.71
CCL28-202ENST00000489442 NABP2Q9BQ15 211 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 GINS4Q9BRT9 223 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 PARP12Q9H0J9 701 aaKnown RBP10.62□□□□□ -0.71
CCL28-202ENST00000489442 LIN7CQ9NUP9 197 aaKnown RBP10.62□□□□□ -0.71
CCL28-202ENST00000489442 RDH8Q9NYR8 311 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 RBM7Q9Y580 266 aaKnown RBP10.62□□□□□ -0.71
CCL28-202ENST00000489442 ETV7Q9Y603 341 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 NOTCH3Q9UM47 2321 aa10.62□□□□□ -0.71
CCL28-202ENST00000489442 TCRBV4S1A1TA0A5B7 111 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 PSMB11A5LHX3 300 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 OPN1MWP04001 364 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 GSTP1P09211 210 aaKnown RBP10.61□□□□□ -0.71
CCL28-202ENST00000489442 GSTT2P0CG29 244 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 GSTT2BP0CG30 244 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 TGFBR1P36897 503 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 GPR12P47775 334 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 GNG2P59768 71 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 PITPNAQ00169 270 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 MMDQ15546 238 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 RPL39P5Q59GN2 51 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 IGSF11Q5DX21 431 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 HACD4Q5VWC8 232 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 FAM71F2Q6NXP2 309 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 Q8N9W7 124 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 CHPT1Q8WUD6 406 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 ST6GALNAC5Q9BVH7 336 aa10.61□□□□□ -0.71
CCL28-202ENST00000489442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCL28-202ENST00000489442 ELF5Q9UKW6 265 aaPredicted RBP10.61□□□□□ -0.71
CCL28-202ENST00000489442 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 TMEM235A6NFC5 223 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 H7C2Y5 167 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 TMEM127O75204 238 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 IGHG2P01859 326 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 DTYMKP23919 212 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 MC5RP33032 325 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 F2RL1P55085 397 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 ACTBP60709 375 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 SLC35B1P78383 322 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 KHDC1LQ5JSQ8 128 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 OR5H6Q8NGV6 325 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 WIPF2Q8TF74 440 aaPredicted RBP10.6□□□□□ -0.71
CCL28-202ENST00000489442 R3HDM4Q96D70 268 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 RBMXL1Q96E39 390 aaKnown RBP10.6□□□□□ -0.71
CCL28-202ENST00000489442 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
CCL28-202ENST00000489442 AGMATQ9BSE5 352 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 ABCG5Q9H222 651 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 PLSCR3Q9NRY6 295 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 KIAA1456Q9P272 454 aa10.6□□□□□ -0.71
CCL28-202ENST00000489442 TRAV18A0A075B6X5 111 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 TRIM64CA6NLI5 447 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 AP4M1O00189 453 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 KCNAB3O43448 404 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 DIRAS3O95661 229 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 OR8U9P0C7N5 309 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 SOX6P35712 828 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 RPS19P39019 145 aaKnown RBP10.59□□□□□ -0.71
CCL28-202ENST00000489442 SRSF7Q16629 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCL28-202ENST00000489442 PNLIPRP3Q17RR3 467 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 FAM131AQ6UXB0 335 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 GLDNQ6ZMI3 551 aaPredicted RBP10.59□□□□□ -0.71
CCL28-202ENST00000489442 ZNF329Q86UD4 541 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 OR8U1Q8NH10 309 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 OR4F4Q96R69 305 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
CCL28-202ENST00000489442 FUNDC2Q9BWH2 189 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms