RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 ZNF736B4DX44 427 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-218ENST00000489037 FABP7O15540 132 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 KCNAB3O43448 404 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 TSPAN15O95858 294 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 CLEC2LP0C7M8 214 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 OR3A3P47888 321 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 SLC35B1P78383 322 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 PITPNAQ00169 270 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 CDNFQ49AH0 187 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 ODF3L1Q8IXM7 274 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 Q8N6K4 173 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 OR10J5Q8NHC4 309 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-218ENST00000489037 NABP2Q9BQ15 211 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 ZNF251Q9BRH9 671 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 MRPL20Q9BYC9 149 aaKnown RBP11.34□□□□□ -0.59
BRCA1-218ENST00000489037 C11orf54Q9H0W9 315 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-218ENST00000489037 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 OR1A1Q9P1Q5 309 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 KCNK7Q9Y2U2 307 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 ETV7Q9Y603 341 aa11.34□□□□□ -0.59
BRCA1-218ENST00000489037 TCRBV4S1A1TA0A5B7 111 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 BET1O15155 118 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 IGHG2P01859 326 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 MC5RP33032 325 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 GPR12P47775 334 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 SRSF7Q16629 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 Q8N9W7 124 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 WIPF2Q8TF74 440 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 GINS4Q9BRT9 223 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 RHBDL2Q9NX52 303 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 RDH8Q9NYR8 311 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
BRCA1-218ENST00000489037 RBM7Q9Y580 266 aaKnown RBP11.33□□□□□ -0.6
BRCA1-218ENST00000489037 DIRAS3O95661 229 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 GSTT2P0CG29 244 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 GSTT2BP0CG30 244 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 DTYMKP23919 212 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 SOX6P35712 828 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 GNG2P59768 71 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 MMDQ15546 238 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 KHDC1LQ5JSQ8 128 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 HACD4Q5VWC8 232 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 DIABLOQ9NR28 239 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 ZNF230Q9UIE0 474 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-218ENST00000489037 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 TSSC4Q9Y5U2 329 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-218ENST00000489037 PKD1L1Q8TDX9 2849 aa11.32□□□□□ -0.6
BRCA1-218ENST00000489037 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 OR5H14A6NHG9 310 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 H7C2Y5 167 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 AP4M1O00189 453 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 F2RL1P55085 397 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 ACTBP60709 375 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 LSM3P62310 102 aaKnown RBP11.31□□□□□ -0.6
BRCA1-218ENST00000489037 CD83Q01151 205 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 IGSF11Q5DX21 431 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 Q6ZS49 121 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 CABLES2Q9BTV7 478 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 ST6GALNAC5Q9BVH7 336 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 PARP12Q9H0J9 701 aaKnown RBP11.31□□□□□ -0.6
BRCA1-218ENST00000489037 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 PLSCR3Q9NRY6 295 aa11.31□□□□□ -0.6
BRCA1-218ENST00000489037 TRBV6-7A0A0A0MS04 114 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 A0A0A6YYH2 397 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 IGKV1-6A0A0C4DH72 117 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 A6NJ64 397 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 NBR2O15453 112 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 PF4V1P10720 104 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-218ENST00000489037 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-218ENST00000489037 TOLLIPQ9H0E2 274 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 ZNF107Q9UII5 783 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-218ENST00000489037 SPATA2Q9UM82 520 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
BRCA1-218ENST00000489037 TRAV18A0A075B6X5 111 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 TMEM235A6NFC5 223 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms