RNA–Protein interactions for RNA: ENST00000489029.1

FAM53A-206, Transcript of family with sequence similarity 53 member A, human

TSL 3

Gene FAM53A, Length 628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM53A-206	ENST00000489029	IGHV3-43	A0A0B4J1X8	118 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029		A0A1W2PPE3	182 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	RGS5	O15539	181 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	LANCL1	O43813	399 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	YPEL1	O60688	119 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	HPGDS	O60760	199 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	IGHV3-43D	P0DP04	118 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	CD83	Q01151	205 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	DEFA6	Q01524	100 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	DIAPH2-AS1	Q14236	149 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	TMEM95	Q3KNT9	176 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	OR1L1	Q8NH94	360 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	MCFD2	Q8NI22	146 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	UBALD1	Q8TB05	177 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	CHPT1	Q8WUD6	406 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	YPEL2	Q96QA6	119 aa		13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	CITED2	Q99967	270 aa	Predicted RBP	13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	SLIRP	Q9GZT3	109 aa	Known RBP	13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.73	□□□□□ -0.21
FAM53A-206	ENST00000489029	TRAV18	A0A075B6X5	111 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	FAM25A	B3EWG3	89 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	FAM25C	B3EWG5	89 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	FAM25G	B3EWG6	89 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	CTDSP2	O14595	271 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	XRCC3	O43542	346 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	NAPSA	O96009	420 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	MOS	P00540	346 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	HIST1H1D	P16402	221 aa	Known RBP	13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	GNB3	P16520	340 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	ELK1	P19419	428 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	MRPS15	P82914	257 aa	Known RBP	13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	HMGN3	Q15651	99 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	MORN2	Q502X0	79 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	CT45A1	Q5HYN5	189 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	CT45A3	Q8NHU0	189 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	ABHD14A	Q9BUJ0	271 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	NXF2	Q9GZY0	626 aa	Known RBP	13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	GHITM	Q9H3K2	345 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	LIN7C	Q9NUP9	197 aa	Known RBP	13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	AK3	Q9UIJ7	227 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	KCNK7	Q9Y2U2	307 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	NOTCH3	Q9UM47	2321 aa		13.72	□□□□□ -0.21
FAM53A-206	ENST00000489029	SERPINE3	A8MV23	424 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	KCNAB3	O43448	404 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	WIPF1	O43516	503 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	EIF4E	P06730	217 aa	Known RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	GSTP1	P09211	210 aa	Known RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	CD3G	P09693	182 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	REG1B	P48304	166 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	NSUN5P1	Q3KNT7	163 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	ZNF260	Q3ZCT1	412 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	FBLN7	Q53RD9	439 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	C9orf152	Q5JTZ5	239 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	FAM71F2	Q6NXP2	309 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	ZNF880	Q6PDB4	577 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	FOXRED2	Q8IWF2	684 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	COMMD1	Q8N668	190 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029		Q8N6K4	173 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	OR10V1	Q8NGI7	309 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	R3HDM4	Q96D70	268 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	EAF1	Q96JC9	268 aa	Predicted RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	CMSS1	Q9BQ75	279 aa	Known RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	ADAM30	Q9UKF2	790 aa		13.71	□□□□□ -0.21
FAM53A-206	ENST00000489029	PSMB11	A5LHX3	300 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	MFNG	O00587	321 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	IGHG2	P01859	326 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	SLC35B1	P78383	322 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	ARFRP1	Q13795	201 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	PNLIPRP3	Q17RR3	467 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	LYG1	Q8N1E2	194 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	OR2AK2	Q8NG84	335 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	GON7	Q9BXV9	100 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	C12orf4	Q9NQ89	552 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	A3GALT2	U3KPV4	340 aa		13.7	□□□□□ -0.22
FAM53A-206	ENST00000489029	TCRBV4S1A1T	A0A5B7	111 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	ADARB2-AS1	A8MUL3	147 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	ITGB1BP1	O14713	200 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	SLC31A2	O15432	143 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	SLC6A1	P30531	599 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	TALDO1	P37837	337 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	ZNF134	P52741	427 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	PITPNA	Q00169	270 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	HNF4G	Q14541	408 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	TMEM69	Q5SWH9	247 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	HACD4	Q5VWC8	232 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	SLC35E3	Q7Z769	313 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	CYYR1	Q96J86	154 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	MIXL1	Q9H2W2	232 aa		13.69	□□□□□ -0.22
FAM53A-206	ENST00000489029	NCBP2L	A6PVI3	153 aa	Known RBP	13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	AP4M1	O00189	453 aa		13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	PF4V1	P10720	104 aa		13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	PPP1CC	P36873	323 aa	Known RBP	13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	LSAMP	Q13449	338 aa		13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	OR52L2P	Q8NGH6	319 aa		13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	EDARADD	Q8WWZ3	215 aa		13.68	□□□□□ -0.22
FAM53A-206	ENST00000489029	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms