RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CCDC59Q9P031 241 aaKnown RBP14.91□□□□□ -0.02
PTCD3-217ENST00000488801 ANAPC10Q9UM13 185 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 CLPSL1A2RUU4 121 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 TAS2R20P59543 309 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 TGIF2LXQ8IUE1 241 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 AP3S1Q92572 193 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 NPFFR1Q9GZQ6 430 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 GHITMQ9H3K2 345 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 ZNF702PQ9H963 129 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 COMMD3Q9UBI1 195 aa14.9□□□□□ -0.02
PTCD3-217ENST00000488801 TET2Q6N021 2002 aaPredicted RBP14.9□□□□□ -0.02
PTCD3-217ENST00000488801 HPGDSO60760 199 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 AMY1AP04745 511 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 AMY2AP04746 511 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 PTHLHP12272 177 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 ELK1P19419 428 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 CD1BP29016 333 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 CEACAM6P40199 344 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 OR3A3P47888 321 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 PROK1P58294 105 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 LSAMPQ13449 338 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 TMEM69Q5SWH9 247 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 C12orf54Q6X4T0 127 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 H1FOOQ8IZA3 346 aaPredicted RBP14.89□□□□□ -0.03
PTCD3-217ENST00000488801 WFDC12Q8WWY7 111 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 SLC25A33Q9BSK2 321 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 BEX1Q9HBH7 125 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 PIPOXQ9P0Z9 390 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 TNCP24821 2201 aa14.89□□□□□ -0.03
PTCD3-217ENST00000488801 WNK1Q9H4A3 2382 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 RAB29O14966 203 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 HSPA12AO43301 675 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 PROP1O75360 226 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 HLA-DQB1P01920 261 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 LPLP06858 475 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 HOGA1Q86XE5 327 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 OR4C13Q8NGP0 309 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 SNAPC3Q92966 411 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 NABP2Q9BQ15 211 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 MRPL20Q9BYC9 149 aaKnown RBP14.88□□□□□ -0.03
PTCD3-217ENST00000488801 ANXA10Q9UJ72 324 aa14.88□□□□□ -0.03
PTCD3-217ENST00000488801 BET1O15155 118 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 IGKV1D-33P01593 117 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 IGKV1-33P01594 117 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 FAM106CPP0CH98 169 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 MZT2AQ6P582 158 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 CNIH2Q6PI25 160 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 GVQW1Q8N7I0 195 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 OR10J5Q8NHC4 309 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 CAPSLQ8WWF8 208 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 ABHD14BQ96IU4 210 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 EAF1Q96JC9 268 aaPredicted RBP14.87□□□□□ -0.03
PTCD3-217ENST00000488801 ZNF747Q9BV97 191 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 ST6GALNAC5Q9BVH7 336 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 MIXL1Q9H2W2 232 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 ADAM30Q9UKF2 790 aa14.87□□□□□ -0.03
PTCD3-217ENST00000488801 IGHV3-72A0A0B4J1Y9 119 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 ZNF736B4DX44 427 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-217ENST00000488801 ZNF701M0R085 212 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-217ENST00000488801 CTXN2P0C2S0 81 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 CBX5P45973 191 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 RPL39P5Q59GN2 51 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 MOB3BQ86TA1 216 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-217ENST00000488801 BEST4Q8NFU0 473 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 C5orf30Q96GV9 206 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 AKR1E2Q96JD6 320 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 SLIRPQ9GZT3 109 aaKnown RBP14.86□□□□□ -0.03
PTCD3-217ENST00000488801 GAB2Q9UQC2 676 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 MOB4Q9Y3A3 225 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 RNF114Q9Y508 228 aa14.86□□□□□ -0.03
PTCD3-217ENST00000488801 FGF16O43320 207 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 TUSC2O75896 110 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 NAT1P18440 290 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 SOX6P35712 828 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 BLCAPP62952 87 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 C11orf88Q6PI97 169 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 Q6ZS46 218 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 DTX3Q8N9I9 347 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 GPX8Q8TED1 209 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 WIPF2Q8TF74 440 aaPredicted RBP14.85□□□□□ -0.03
PTCD3-217ENST00000488801 NXF2Q9GZY0 626 aaKnown RBP14.85□□□□□ -0.03
PTCD3-217ENST00000488801 SERTAD4Q9NUC0 356 aa14.85□□□□□ -0.03
PTCD3-217ENST00000488801 TRRAPQ9Y4A5 3859 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 M0QZK8 103 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 NOL3O60936 208 aaKnown RBP14.84□□□□□ -0.03
PTCD3-217ENST00000488801 TPPPO94811 219 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 CT45A6P0DMU7 189 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 CT45A5P0DMU8 189 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 CT45A7P0DMV0 189 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 TMEM11P17152 192 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 KRTAP10-3P60369 221 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 C5orf56Q8N8D9 126 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 OR5AN1Q8NGI8 311 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 OR2T10Q8NGZ9 312 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 S1PR3Q99500 378 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 GINS4Q9BRT9 223 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 PLSCR3Q9NRY6 295 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 SIGLEC9Q9Y336 463 aa14.84□□□□□ -0.03
PTCD3-217ENST00000488801 OR5H14A6NHG9 310 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms