RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ABCA11PQ4W5N1 156 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 FGFRL1Q8N441 504 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 TOMM40LQ969M1 308 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 RRNAD1Q96FB5 475 aaKnown RBP16.02■□□□□ 0.15
CCM2-216ENST00000488727 C1orf159Q96HA4 380 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 DNTTIP1Q9H147 329 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 SPACA1Q9HBV2 294 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 Q9N2K0 584 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 OR5AC2Q9NZP5 309 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 NUP50Q9UKX7 468 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■□□ 15.8
CCM2-216ENST00000488727 ABCA1O95477 2261 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 CRYZL1O95825 349 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 IFNA21P01568 189 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 GLAP06280 429 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 HEXAP06865 529 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 IGHV4-31P0DP07 118 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 CCDC71LQ8N9Z2 235 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 ZNRF1Q8ND25 227 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 OR8B3Q8NGG8 313 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 RTN4IP1Q8WWV3 396 aaPredicted RBP16.01■□□□□ 0.15
CCM2-216ENST00000488727 SDSLQ96GA7 329 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 OR8B2Q96RD0 313 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 SHARPINQ9H0F6 387 aa16.01■□□□□ 0.15
CCM2-216ENST00000488727 F8P00451 2351 aa16■□□□□ 0.15
CCM2-216ENST00000488727 NKX6-3A6NJ46 265 aa16■□□□□ 0.15
CCM2-216ENST00000488727 SIGLEC5O15389 551 aa16■□□□□ 0.15
CCM2-216ENST00000488727 PHF1O43189 567 aaPredicted RBP16■□□□□ 0.15
CCM2-216ENST00000488727 HAND1O96004 215 aa16■□□□□ 0.15
CCM2-216ENST00000488727 TPT1P13693 172 aaKnown RBP16■□□□□ 0.15
CCM2-216ENST00000488727 KRTAP1-1Q07627 177 aa16■□□□□ 0.15
CCM2-216ENST00000488727 PAN3Q58A45 887 aaKnown RBP16■□□□□ 0.15
CCM2-216ENST00000488727 SPIN3Q5JUX0 258 aa16■□□□□ 0.15
CCM2-216ENST00000488727 RIMS4Q9H426 269 aaPredicted RBP16■□□□□ 0.15
CCM2-216ENST00000488727 IFT22Q9H7X7 185 aa16■□□□□ 0.15
CCM2-216ENST00000488727 SLC2A9Q9NRM0 540 aa16■□□□□ 0.15
CCM2-216ENST00000488727 CYTL1Q9NRR1 136 aa16■□□□□ 0.15
CCM2-216ENST00000488727 TRBV6-6A0A0A6YYG2 114 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 DVL1O14640 695 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 AADACP22760 399 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 ZFP36P26651 326 aaKnown RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 HERV-K104P61576 105 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 COL10A1Q03692 680 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 IAH1Q2TAA2 248 aaPredicted RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 GGNBP1Q5YKI7 109 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 FIP1L1Q6UN15 594 aaKnown RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 FAM185AQ8N0U4 392 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 BVESQ8NE79 360 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 MSI2Q96DH6 328 aaKnown RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 SMR3AQ99954 134 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 LPAR2Q9HBW0 351 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 CSPG4Q6UVK1 2322 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 KIAA1324LA8MWY0 1029 aaPredicted RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 KRBOX1C9JBD0 128 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 PPYP01298 95 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 FXYD4P59646 89 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 WDR25Q64LD2 544 aaPredicted RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 LIAT1Q6ZQX7 453 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 SSBP3Q9BWW4 388 aaPredicted RBP15.99■□□□□ 0.15
CCM2-216ENST00000488727 CLN8Q9UBY8 286 aa15.99■□□□□ 0.15
CCM2-216ENST00000488727 KIR2DS1A0A191URI9 304 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 MSGN1A6NI15 193 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 OR2H2O95918 312 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 OR5AC1P0C628 307 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 KIR2DS4P43632 304 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 GNB2P62879 340 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 LCN2P80188 198 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 KIR2DS1Q14954 304 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 FAM74A1Q5RGS3 127 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 Q6P435 159 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 ZNF561Q8N587 486 aa15.98■□□□□ 0.15
CCM2-216ENST00000488727 SEBOXQ9HB31 216 aaPredicted RBP15.98■□□□□ 0.15
CCM2-216ENST00000488727 ZNF737O75373 536 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 CTXN2P0C2S0 81 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 FOSL1P15407 271 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 RND3P61587 244 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 BAP18Q8IXM2 172 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 SLC5A7Q9GZV3 580 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 GSKIPQ9P0R6 139 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 B4DSR2 109 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 SIRPB1O00241 398 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 SH2D1BO14796 132 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 TAAR5O14804 337 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 FGF16O43320 207 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 KCNAB3O43448 404 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 NDUFB3O43676 98 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 PSPNO60542 156 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 DIRAS3O95661 229 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 ZNF16P17020 682 aaPredicted RBP15.97■□□□□ 0.15
CCM2-216ENST00000488727 M6PRP20645 277 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 S100A10P60903 97 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 IGSF11Q5DX21 431 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 LGI3Q8N145 548 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 LINC01356Q8N9X3 169 aa15.97■□□□□ 0.15
CCM2-216ENST00000488727 SLC25A10Q9UBX3 287 aaPredicted RBP15.97■□□□□ 0.15
CCM2-216ENST00000488727 TLN2Q9Y4G6 2542 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 TRDCB7Z8K6 153 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 DEDDO75618 318 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 TUSC2O75896 110 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 MSMBP08118 114 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms