RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 FUNDC2Q9BWH2 189 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 MRPL20Q9BYC9 149 aaKnown RBP11.24□□□□□ -0.61
COL9A2-208ENST00000488463 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 ELF5Q9UKW6 265 aaPredicted RBP11.24□□□□□ -0.61
COL9A2-208ENST00000488463 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
COL9A2-208ENST00000488463 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 ST8SIA5O15466 376 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 RGS11O94810 467 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 MOSP00540 346 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 IGHG2P01859 326 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 FCGR3AP08637 254 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 CSF1P09603 554 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 GNB3P16520 340 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 F2RL1P55085 397 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 NDUFA11Q86Y39 141 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 FAM71E2Q8N5Q1 922 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 RAB2BQ8WUD1 216 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 RITA1Q96K30 269 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL9A2-208ENST00000488463 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
COL9A2-208ENST00000488463 TRDCB7Z8K6 153 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
COL9A2-208ENST00000488463 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
COL9A2-208ENST00000488463 FAM71F2Q6NXP2 309 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 FAM110DQ8TAY7 271 aaPredicted RBP11.22□□□□□ -0.61
COL9A2-208ENST00000488463 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
COL9A2-208ENST00000488463 S1PR3Q99500 378 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 C11orf54Q9H0W9 315 aaPredicted RBP11.22□□□□□ -0.61
COL9A2-208ENST00000488463 ABCG5Q9H222 651 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
COL9A2-208ENST00000488463 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 SERPINE3A8MV23 424 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 CD3GP09693 182 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 CT45A6P0DMU7 189 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 CT45A5P0DMU8 189 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 CT45A7P0DMV0 189 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 ZBTB25P24278 435 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 TGFBR1P36897 503 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 CEACAM6P40199 344 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 MXD1Q05195 221 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 RPL39P5Q59GN2 51 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 C9orf152Q5JTZ5 239 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 Q6ZS49 121 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 OR5H6Q8NGV6 325 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 DGCR14Q96DF8 476 aaKnown RBP11.21□□□□□ -0.61
COL9A2-208ENST00000488463 SLC25A38Q96DW6 304 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 ABHD14BQ96IU4 210 aa11.21□□□□□ -0.61
COL9A2-208ENST00000488463 LIN7CQ9NUP9 197 aaKnown RBP11.21□□□□□ -0.61
COL9A2-208ENST00000488463 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
COL9A2-208ENST00000488463 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF701M0R085 212 aaPredicted RBP11.2□□□□□ -0.62
COL9A2-208ENST00000488463 FABP7O15540 132 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 PEX14O75381 377 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 OPN1MWP04001 364 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 GSTT2P0CG29 244 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 GSTT2BP0CG30 244 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 OPN1MW2P0DN77 364 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 OPN1MW3P0DN78 364 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 CNTFRP26992 372 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 GPR12P47775 334 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL9A2-208ENST00000488463 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 CDNFQ49AH0 187 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 IGSF11Q5DX21 431 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 CENPVQ7Z7K6 275 aaPredicted RBP11.2□□□□□ -0.62
COL9A2-208ENST00000488463 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 ATG5Q9H1Y0 275 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
COL9A2-208ENST00000488463 RSL24D1Q9UHA3 163 aaKnown RBP11.2□□□□□ -0.62
COL9A2-208ENST00000488463 A0A075B6Q4 140 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 TRBV6-7A0A0A0MS04 114 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
COL9A2-208ENST00000488463 RAB29O14966 203 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 DIRAS3O95661 229 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 SCAND1P57086 179 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 LSM3P62310 102 aaKnown RBP11.19□□□□□ -0.62
COL9A2-208ENST00000488463 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 SLC35E3Q7Z769 313 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 EDARADDQ8WWZ3 215 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 C5orf30Q96GV9 206 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 GHITMQ9H3K2 345 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
COL9A2-208ENST00000488463 DPPA5A6NC42 116 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 H0YJW9 148 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 HSPA12AO43301 675 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 SSX5O60225 188 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 GABARAPO95166 117 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 SOX6P35712 828 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 SERPINB10P48595 397 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 LINC00205P59089 165 aa11.18□□□□□ -0.62
COL9A2-208ENST00000488463 ACTBP60709 375 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms