RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 OR8U8P0C7N1 319 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 SRMP19623 302 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 HTR2CP28335 458 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 KIAA0141Q14154 515 aaPredicted RBP13.35□□□□□ -0.27
SMC4-216ENST00000485645 MED22Q15528 200 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 HSD17B12Q53GQ0 312 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 FAM71F2Q6NXP2 309 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 OR1N2Q8NGR9 330 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 NICN1Q9BSH3 213 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 IFI27L2Q9H2X8 130 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 GNB4Q9HAV0 340 aa13.35□□□□□ -0.27
SMC4-216ENST00000485645 I3L521 148 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 RAB29O14966 203 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 ST8SIA5O15466 376 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 NDUFA3O95167 84 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 NAPSAO96009 420 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 BLVRBP30043 206 aaPredicted RBP13.34□□□□□ -0.27
SMC4-216ENST00000485645 RAB9AP51151 201 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 RUNX1Q01196 453 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 ZNF616Q08AN1 781 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 ZNF880Q6PDB4 577 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 PRSS48Q7RTY5 328 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 SVOPQ8N4V2 548 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 SETD6Q8TBK2 473 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 OR5B12Q96R08 314 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 KCNK15Q9H427 330 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
SMC4-216ENST00000485645 TMEM14DPA8MWL7 114 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 SLC22A1O15245 554 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 INSL3P51460 131 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 UNC119Q13432 240 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 MOB1BQ7L9L4 216 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 MINDY2Q8NBR6 621 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 OR6M1Q8NGM8 313 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 CCDC90BQ9GZT6 254 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 RIMS4Q9H426 269 aaPredicted RBP13.33□□□□□ -0.28
SMC4-216ENST00000485645 SLC23A1Q9UHI7 598 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
SMC4-216ENST00000485645 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
SMC4-216ENST00000485645 RRP15Q9Y3B9 282 aaKnown RBP13.33□□□□□ -0.28
SMC4-216ENST00000485645 OR5H14A6NHG9 310 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 BPNT1O95861 308 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 CT45A6P0DMU7 189 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 CT45A5P0DMU8 189 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 CT45A7P0DMV0 189 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 CD37P11049 281 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 GNB1P62873 340 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 QRFPP83859 136 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 PLGLAQ15195 96 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 RPL39P5Q59GN2 51 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 ZNF660Q6AZW8 331 aaPredicted RBP13.32□□□□□ -0.28
SMC4-216ENST00000485645 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 ISYNA1Q9NPH2 558 aa13.32□□□□□ -0.28
SMC4-216ENST00000485645 SORL1Q92673 2214 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 A0A1W2PN81 502 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 RRHO14718 337 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
SMC4-216ENST00000485645 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
SMC4-216ENST00000485645 UCHL1P09936 223 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 MC5RP33032 325 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 CHRNA7P36544 502 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 NDPQ00604 133 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 TPBGQ13641 420 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 LIPKQ5VXJ0 399 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 GLDNQ6ZMI3 551 aaPredicted RBP13.31□□□□□ -0.28
SMC4-216ENST00000485645 UFD1Q92890 307 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 ABHD14BQ96IU4 210 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 URM1Q9BTM9 101 aaKnown RBP13.31□□□□□ -0.28
SMC4-216ENST00000485645 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 FBXL15Q9H469 300 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 Q9H521 79 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 U3KQK5 164 aa13.31□□□□□ -0.28
SMC4-216ENST00000485645 A0A0A6YYD4 124 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 H0YJW9 148 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 H7C2Y5 167 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 ITGB1BP1O14713 200 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 SOCS1O15524 211 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 LY86O95711 162 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 ARSBP15848 533 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 CRIP2P52943 208 aaPredicted RBP13.3□□□□□ -0.28
SMC4-216ENST00000485645 CX3CL1P78423 397 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
SMC4-216ENST00000485645 MLLT11Q13015 90 aaPredicted RBP13.3□□□□□ -0.28
SMC4-216ENST00000485645 TCTEX1D1Q8N7M0 179 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 AGMATQ9BSE5 352 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 PARP12Q9H0J9 701 aaKnown RBP13.3□□□□□ -0.28
SMC4-216ENST00000485645 PLGRKTQ9HBL7 147 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 AK3Q9UIJ7 227 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 MGAT4AQ9UM21 535 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
SMC4-216ENST00000485645 WASHC3Q9Y3C0 194 aa13.3□□□□□ -0.28
SMC4-216ENST00000485645 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms