RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 SMIM18P0DKX4 95 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CD37P11049 281 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 HTR2CP28335 458 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 TMBIM6P55061 237 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 C1orf100Q5SVJ3 147 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 AWAT2Q6E213 333 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 C22orf42Q6IC83 251 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 TMEM65Q6PI78 240 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 MINDY2Q8NBR6 621 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 KCNG3Q8TAE7 436 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CITED4Q96RK1 184 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 GNB4Q9HAV0 340 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
HDAC6-227ENST00000485102 MRPS28Q9Y2Q9 187 aaKnown RBP10.1□□□□□ -0.79
HDAC6-227ENST00000485102 TRAV8-7A0A075B6U6 113 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 LCE6AA0A183 80 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 A0A1W2PPK0 400 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 NOTOA8MTQ0 251 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 C12orf77C9JDV5 145 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 SLC17A2O00624 439 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 OVOL1O14753 267 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 SLC22A1O15245 554 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 SLC31A2O15432 143 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 SPINT2O43291 252 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 CA11O75493 328 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 TFAP2AP05549 437 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 LYL1P12980 280 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 GADD45AP24522 165 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 RAB9AP51151 201 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 LSAMPQ13449 338 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 ARL6IP1Q15041 203 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 RAB11BQ15907 218 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 FAM53AQ6NSI3 398 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-227ENST00000485102 TRAT1Q6PIZ9 186 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 LRRTM1Q86UE6 522 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 CCDC107Q8WV48 283 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 DCUN1D4Q92564 292 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 AP3S1Q92572 193 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 PTX4Q96A99 478 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 URM1Q9BTM9 101 aaKnown RBP10.09□□□□□ -0.79
HDAC6-227ENST00000485102 FUNDC2Q9BWH2 189 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 OR51J1Q9H342 316 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 STEAP1Q9UHE8 339 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 ING4Q9UNL4 249 aa10.09□□□□□ -0.79
HDAC6-227ENST00000485102 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 IGHV3-43A0A0B4J1X8 118 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 ZNF701M0R085 212 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-227ENST00000485102 AIPO00170 330 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 GABARAPO95166 117 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 LY86O95711 162 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 GLAP06280 429 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 IGHV3-43DP0DP04 118 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 ARSBP15848 533 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 CRIP2P52943 208 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-227ENST00000485102 GNB1P62873 340 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 MMDQ15546 238 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 LY6G6FQ5SQ64 297 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 C6orf183Q5T699 404 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 GLIPR1L1Q6UWM5 242 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 ZNF554Q86TJ5 538 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
HDAC6-227ENST00000485102 OR51E2Q9H255 320 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 TPSG1Q9NRR2 321 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 GNG12Q9UBI6 72 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 TNCP24821 2201 aa10.08□□□□□ -0.8
HDAC6-227ENST00000485102 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 SMIM31A0A1B0GVY4 71 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 METTL21EPA6NDL7 271 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 IFITM5A6NNB3 132 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 G3V318 75 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 HBZP02008 142 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 FRMD6-AS1P0C7T7 363 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 SPNP16150 400 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 MORN2Q502X0 79 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 ATAD3CQ5T2N8 411 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 ACSM6Q6P461 480 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 NPBQ8NG41 125 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 UBALD1Q8TB05 177 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 ACOT12Q8WYK0 555 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
HDAC6-227ENST00000485102 TRAPPC2LQ9UL33 140 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 WSB1Q9Y6I7 421 aa10.07□□□□□ -0.8
HDAC6-227ENST00000485102 A8MZ25 164 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 MCRIP1C9JLW8 97 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ARPC1BO15143 372 aaKnown RBP10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ATP6V0E1O15342 81 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 NDUFA3O95167 84 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 SLC2A2P11168 524 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-227ENST00000485102 GP9P14770 177 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 RAB6AP20340 208 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 SERPINA2P20848 420 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 RORCP51449 518 aa10.06□□□□□ -0.8
HDAC6-227ENST00000485102 ACTBP60709 375 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms