RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 H3BPC8 53 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 SMLR1H3BR10 107 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 GOLGA8RI6L899 631 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 SCN2BO60939 215 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 ARL6IP5O75915 188 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 RD3LP0DJH9 198 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 ESDP10768 282 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 ORM2P19652 201 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 GADD45AP24522 165 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 AGTR1P30556 359 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 HSPA9P38646 679 aaKnown RBP0.56□□□□□ -2.32
VPS50-216ENST00000484954 AKR1C2P52895 323 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
VPS50-216ENST00000484954 PMS2P3Q13401 168 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 C1DQ13901 141 aaKnown RBP0.56□□□□□ -2.32
VPS50-216ENST00000484954 PDK2Q15119 407 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 SYCP1Q15431 976 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 FAM45BPQ6NSW5 357 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 OR51H1Q8NH63 302 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 ERMNQ8TAM6 284 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 STOML3Q8TAV4 291 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 SPACA4Q8TDM5 124 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 TMBIM1Q969X1 311 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 TRNT1Q96Q11 434 aaKnown RBP0.56□□□□□ -2.32
VPS50-216ENST00000484954 GPR22Q99680 433 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 HSPB9Q9BQS6 159 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 MED10Q9BTT4 135 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 COMMD9Q9P000 198 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 FIS1Q9Y3D6 152 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 TMEM94Q12767 1356 aa0.56□□□□□ -2.32
VPS50-216ENST00000484954 TRPM3Q9HCF6 1732 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 MDC1Q14676 2089 aaKnown RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 CACNA1SQ13698 1873 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 CEP170Q5SW79 1584 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 C11orf86A6NJI1 115 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 OR5K4A6NMS3 321 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 M0QYV0 167 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 ZW10O43264 779 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 NPPAP01160 153 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 GPX1P07203 203 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 OR13C7P0DN81 318 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 SLC25A16P16260 332 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 CD36P16671 472 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 NPPCP23582 126 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 ADORA1P30542 326 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 GRPRP30550 384 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 RCVRNP35243 200 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 CD200P41217 278 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 SERPINB10P48595 397 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 SLC35A2P78381 396 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 TMEM267Q0VDI3 215 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 ZNHIT3Q15649 155 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 USF2Q15853 346 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 CLEC6AQ6EIG7 209 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 TTC33Q6PID6 262 aaPredicted RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 LFNGQ8NES3 379 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 OR10A6Q8NH74 314 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 FNDC9Q8TBE3 224 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 DCANP1Q8TF63 244 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 PPCDCQ96CD2 204 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 MBOAT7Q96N66 472 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 OR52B2Q96RD2 323 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 MRPL32Q9BYC8 188 aaKnown RBP0.55□□□□□ -2.32
VPS50-216ENST00000484954 BCL2L14Q9BZR8 327 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 MED28Q9H204 178 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 C1orf109Q9NX04 203 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 CHMP5Q9NZZ3 219 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 CD300AQ9UGN4 299 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 FAM215AQ9Y5M1 114 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 MAP3K19Q56UN5 1328 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 DSCAML1Q8TD84 2053 aa0.55□□□□□ -2.32
VPS50-216ENST00000484954 PXDNLA1KZ92 1463 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 FBN2P35556 2912 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 TMEM213A2RRL7 107 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 METTL15A6NJ78 407 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 ZNF705FA8MVS1 300 aaPredicted RBP0.54□□□□□ -2.32
VPS50-216ENST00000484954 HSBP1L1C9JCN9 74 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 F8VZ95 297 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 TOX3O15405 576 aaPredicted RBP0.54□□□□□ -2.32
VPS50-216ENST00000484954 GNRH2O43555 120 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 TRAPPC3O43617 180 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 STK16O75716 305 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 ATP5G1P05496 136 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 CD7P09564 240 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 ZNF728P0DKX0 622 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 ALOX5APP20292 161 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 CRHBPP24387 322 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 PEBP1P30086 187 aaKnown RBP0.54□□□□□ -2.32
VPS50-216ENST00000484954 CLDN12P56749 244 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 SNAP25P60880 206 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 DAD1P61803 113 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 HERVK_113P63121 156 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 TBC1D28Q2M2D7 210 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 LGALS9BQ3B8N2 356 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 LCN8Q6JVE9 175 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 C2orf91Q6ZV80 131 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 C1orf174Q8IYL3 243 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 PACRGLQ8N7B6 248 aa0.54□□□□□ -2.32
VPS50-216ENST00000484954 OR52E4Q8NGH9 312 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms