RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SEC16AO15027 2179 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 LOC102725191A0A1B0GVB3 256 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF878C9JN71 531 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 CNIH1O95406 144 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ECI1P42126 302 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 EMDP50402 254 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 CTXN1P60606 82 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 RHOBP62745 196 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 PHLDA2Q53GA4 152 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 C22orf39Q6P5X5 142 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 GLIPR1L1Q6UWM5 242 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 LHFPL2Q6ZUX7 228 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 MED12LQ86YW9 2145 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 BOD1L2Q8IYS8 172 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 DCAF4L2Q8NA75 395 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF114Q8NC26 417 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 LHX4Q969G2 390 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM45BQ96B21 275 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 BORCS7Q96B45 105 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SLC17A4Q9Y2C5 497 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 HS3ST3A1Q9Y663 406 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 BRCA2P51587 3418 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 PGPEP1LA6NFU8 196 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SRSF10O75494 262 aaKnown RBP6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SLC35E2P0CK97 266 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 PF4V1P10720 104 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SRD5A2P31213 254 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 PSMB3P49720 205 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 NRN1LQ496H8 165 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF658BQ4V348 819 aaPredicted RBP6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SPATA12Q7Z6I5 190 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 LRRC75AQ8NAA5 344 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ADAT3Q96EY9 351 aaPredicted RBP6.68□□□□□ -1.34
COL4A5-205ENST00000483338 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 NAA38Q9BRA0 125 aaKnown RBP6.68□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM204Q9BSN7 226 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 WDR61Q9GZS3 305 aaKnown RBP6.68□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF576Q9H609 170 aa6.68□□□□□ -1.34
COL4A5-205ENST00000483338 TNFRSF13BO14836 293 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 HMGB3O15347 200 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 TNFP01375 233 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 HLA-DQA2P01906 255 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NTF3P20783 257 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NPY1RP25929 384 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ID1P41134 155 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 IER3P46695 156 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 CYB561P49447 251 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ROM1Q03395 351 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 LY6G5CQ5SRR4 150 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 HSD11B1LQ7Z5J1 315 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 OR5D14Q8NGL3 314 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 C8orf44Q96CB5 159 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 LAMA3Q16787 3333 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 MKI67P46013 3256 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 A0A087X0K7 114 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NPIPA5E9PKD4 350 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NPIPA3F8WFD2 350 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NXPH3O95157 252 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 CELA3AP09093 270 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 VDAC1P21796 283 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 TGFBR3Q03167 851 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 GABRA6Q16445 453 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ACSF3Q4G176 576 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 EBLN2Q6P2I7 272 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 WDR74Q6RFH5 385 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 FAM57BQ71RH2 274 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 MRPL43Q8N983 215 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 TSKUQ8WUA8 353 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NINJ1Q92982 152 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM59Q9BXS4 323 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 CHRNA10Q9GZZ6 450 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ST20Q9HBF5 79 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 PNRC2Q9NPJ4 139 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 NPIPA1Q9UND3 350 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 SNRNP200O75643 2136 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 KIAA1549LQ6ZVL6 1849 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 SNURFLB1AK76 121 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 CLDN1O95832 211 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 IFNA5P01569 189 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 SRFP11831 508 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 EGR1P18146 543 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 HIST1H1TP22492 207 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 SSTR5P35346 364 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ABCA11PQ4W5N1 156 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ALG10Q5BKT4 473 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 OR10J3Q5JRS4 329 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 TMEM164Q5U3C3 297 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ZNF324BQ6AW86 544 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 JKAMPQ9P055 326 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 ERRFI1Q9UJM3 462 aaPredicted RBP6.67□□□□□ -1.34
COL4A5-205ENST00000483338 SPACA6W5XKT8 324 aa6.67□□□□□ -1.34
COL4A5-205ENST00000483338 PSMB11A5LHX3 300 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 PHF1O43189 567 aaPredicted RBP6.66□□□□□ -1.34
COL4A5-205ENST00000483338 RHBDL1O75783 438 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 ISG15P05161 165 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 SERPINE2P07093 398 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 SLC25A6P12236 298 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 OR3A4PP47883 348 aa6.66□□□□□ -1.34
COL4A5-205ENST00000483338 PLCXD2Q0VAA5 305 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms