RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 STUB1Q9UNE7 303 aa10.99□□□□□ -0.65
VARS-225ENST00000482996 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 METTL21EPA6NDL7 271 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 AP4M1O00189 453 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 RAB29O14966 203 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 RAB6AP20340 208 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ZBTB25P24278 435 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 FGF9P31371 208 aaPredicted RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 GPR12P47775 334 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 OR3A3P47888 321 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 PDLIM3Q53GG5 364 aaPredicted RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 FAM71F2Q6NXP2 309 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 C10orf99Q6UWK7 81 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 Q6ZPA2 131 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ZNF833PQ6ZTB9 187 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ODF3L1Q8IXM7 274 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 ISOC1Q96CN7 298 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 NOL4LQ96MY1 436 aaPredicted RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 CHCHD6Q9BRQ6 235 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 GHITMQ9H3K2 345 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 PLSCR3Q9NRY6 295 aa10.98□□□□□ -0.65
VARS-225ENST00000482996 TXNL4BQ9NX01 149 aaKnown RBP10.98□□□□□ -0.65
VARS-225ENST00000482996 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 TRDCB7Z8K6 153 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 ITGB1BP1O14713 200 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 GABARAPO95166 117 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 PF4P02776 101 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 CEACAM6P40199 344 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 PLA2G7Q13093 441 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 MMDQ15546 238 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 TPRA1Q86W33 373 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 STPG2Q8N412 459 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 OR10R2Q8NGX6 335 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 PTX4Q96A99 478 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 PHF21AQ96BD5 680 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 ZNF251Q9BRH9 671 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 GON7Q9BXV9 100 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 LINC00527Q9UJ94 153 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 CEPT1Q9Y6K0 416 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 PLXNB1O43157 2135 aa10.97□□□□□ -0.65
VARS-225ENST00000482996 G3V4G9 280 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 SCTP09683 121 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 SOX6P35712 828 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 F2RL1P55085 397 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 ACTBP60709 375 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.65
VARS-225ENST00000482996 ARL6IP1Q15041 203 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 FAM71E2Q8N5Q1 922 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
VARS-225ENST00000482996 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
VARS-225ENST00000482996 A0A075B6Q4 140 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 A0A0B4J203 849 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 SMIM30A4D0T7 59 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 RAB27BO00194 218 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 SLC2A2P11168 524 aaPredicted RBP10.95□□□□□ -0.66
VARS-225ENST00000482996 HIST1H1DP16402 221 aaKnown RBP10.95□□□□□ -0.66
VARS-225ENST00000482996 GNB3P16520 340 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 CD33P20138 364 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 TALDO1P37837 337 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 SERPINB10P48595 397 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 KIR2DS1Q14954 304 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 MOGAT2Q3SYC2 334 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 OR4A4PQ8NGN8 299 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 ABHD14BQ96IU4 210 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 KCTD7Q96MP8 289 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 PARP12Q9H0J9 701 aaKnown RBP10.95□□□□□ -0.66
VARS-225ENST00000482996 C11orf54Q9H0W9 315 aaPredicted RBP10.95□□□□□ -0.66
VARS-225ENST00000482996 ATG5Q9H1Y0 275 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 OR51E2Q9H255 320 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 ZFP57Q9NU63 452 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 KIAA1456Q9P272 454 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 ZNF221Q9UK13 617 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 KCNK7Q9Y2U2 307 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 TGP01266 2768 aa10.95□□□□□ -0.66
VARS-225ENST00000482996 OR5H14A6NHG9 310 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 LINC01548A6NM66 108 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 H3BMQ9 156 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 MFNGO00587 321 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 NBR2O15453 112 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 FABP7O15540 132 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 FCGR3AP08637 254 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 VDAC1P21796 283 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 SLC6A1P30531 599 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 MC5RP33032 325 aa10.94□□□□□ -0.66
VARS-225ENST00000482996 RPL23AP62750 156 aaKnown RBP10.94□□□□□ -0.66
VARS-225ENST00000482996 ARFRP1Q13795 201 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms