RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CLVS1Q8IUQ0 354 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-214ENST00000482733 ODF3L1Q8IXM7 274 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 Q8N2B8 174 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 OR10J5Q8NHC4 309 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 RAB2BQ8WUD1 216 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 NUDCD2Q8WVJ2 157 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 S1PR3Q99500 378 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 ELF5Q9UKW6 265 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-214ENST00000482733 TRBV6-7A0A0A0MS04 114 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 BET1O15155 118 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 ST8SIA5O15466 376 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF182P17025 639 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-214ENST00000482733 TMBIM6P55061 237 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 HERPUD1Q15011 391 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 MZT2AQ6P582 158 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 MAFIPQ8WZ33 124 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 AGMATQ9BSE5 352 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 C11orf54Q9H0W9 315 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-214ENST00000482733 AUNIPQ9H7T9 357 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF702PQ9H963 129 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 RDH8Q9NYR8 311 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 COMMD3Q9UBI1 195 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
HMGN1-214ENST00000482733 SAA2-SAA4A0A096LPE2 208 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 NOL3O60936 208 aaKnown RBP13.25□□□□□ -0.29
HMGN1-214ENST00000482733 APOA1P02647 267 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 SAA2P0DJI9 122 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-214ENST00000482733 CBX5P45973 191 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 BLCAPP62952 87 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 IGSF11Q5DX21 431 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 TMEM69Q5SWH9 247 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 EAF1Q96JC9 268 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-214ENST00000482733 GINS4Q9BRT9 223 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF221Q9UK13 617 aa13.25□□□□□ -0.29
HMGN1-214ENST00000482733 SMIM31A0A1B0GVY4 71 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 FGF16O43320 207 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 SSX5O60225 188 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 MOSP00540 346 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 SOX6P35712 828 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 OR3A3P47888 321 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 LSAMPQ13449 338 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 HNF4GQ14541 408 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 ARSJQ5FYB0 599 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-214ENST00000482733 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 OR8H1Q8NGG4 311 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 NABP2Q9BQ15 211 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 PARP12Q9H0J9 701 aaKnown RBP13.24□□□□□ -0.29
HMGN1-214ENST00000482733 ANXA10Q9UJ72 324 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 SIGLEC9Q9Y336 463 aa13.24□□□□□ -0.29
HMGN1-214ENST00000482733 IGKV1D-8A0A087WSZ0 117 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 FBLN7Q53RD9 439 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 Q8N6K4 173 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-214ENST00000482733 ABHD14BQ96IU4 210 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF251Q9BRH9 671 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 MRPL20Q9BYC9 149 aaKnown RBP13.23□□□□□ -0.29
HMGN1-214ENST00000482733 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
HMGN1-214ENST00000482733 PEX14O75381 377 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 VDAC2P45880 294 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-214ENST00000482733 GPR12P47775 334 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 TAS2R20P59543 309 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 ABCA11PQ4W5N1 156 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 HOGA1Q86XE5 327 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 H1FOOQ8IZA3 346 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-214ENST00000482733 CITED1Q99966 193 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 RNF150Q9ULK6 438 aa13.22□□□□□ -0.29
HMGN1-214ENST00000482733 OR5H14A6NHG9 310 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 NCBP2LA6PVI3 153 aaKnown RBP13.21□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF736B4DX44 427 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-214ENST00000482733 AMY1AP04745 511 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 AMY2AP04746 511 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
HMGN1-214ENST00000482733 OR8U9P0C7N5 309 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 MC5RP33032 325 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 SPCS2Q15005 226 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 RPL39P5Q59GN2 51 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 C5orf56Q8N8D9 126 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 BEST4Q8NFU0 473 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
HMGN1-214ENST00000482733 RBM7Q9Y580 266 aaKnown RBP13.21□□□□□ -0.29
HMGN1-214ENST00000482733 HPGDSO60760 199 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 CT45A6P0DMU7 189 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 CT45A5P0DMU8 189 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 CT45A7P0DMV0 189 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 PRSS3P35030 304 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 ARPC4P59998 168 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 Q6ZS46 218 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 KLHDC1Q8N7A1 406 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 IFT46Q9NQC8 304 aa13.2□□□□□ -0.3
HMGN1-214ENST00000482733 FAM25AB3EWG3 89 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 FAM25CB3EWG5 89 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 FAM25GB3EWG6 89 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms