RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ETAA1Q9NY74 926 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 KIF25Q9UIL4 384 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 PSG11Q9UQ72 335 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 PEX16Q9Y5Y5 336 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 ETV7Q9Y603 341 aa3.92□□□□□ -1.78
PTCD3-213ENST00000480102 H3BSH0 61 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 H3BUX3 64 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 M0QZ24 198 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RBBP9O75884 186 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 MMP23AO75900 390 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SLC22A5O76082 557 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SPDEFO95238 335 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 GAPDHP04406 335 aaKnown RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ELANEP08246 267 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 FGF2P09038 288 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RAB3BP20337 219 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SERPINA2P20848 420 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 GCSHP23434 173 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ZBTB25P24278 435 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 DUSP1P28562 367 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 TMEM50BP56557 158 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RPS16P62249 146 aaKnown RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RPS25P62851 125 aaKnown RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ATXN7L3Q14CW9 347 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RAB11BQ15907 218 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SSX2Q16385 188 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 C2orf76Q3KRA6 126 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 FAM27D1Q5T7N8 215 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF782Q6ZMW2 699 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF771Q7L3S4 317 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 LHFPL4Q7Z7J7 247 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 TGIF2LXQ8IUE1 241 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 CADM3Q8N126 398 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 Q8N6K4 173 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ZFP41Q8N8Y5 198 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 OR2T6Q8NHC8 308 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 MRPL30Q8TCC3 161 aaKnown RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RPEQ96AT9 228 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 RBM14Q96PK6 669 aaKnown RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 GFI1Q99684 422 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 CABLES2Q9BTV7 478 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 GON7Q9BXV9 100 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 TINAGL1Q9GZM7 467 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-213ENST00000480102 PRSS22Q9GZN4 317 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 TAF9BQ9HBM6 251 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ZNF286AQ9HBT8 521 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SERTAD4Q9NUC0 356 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 PLEKHJ1Q9NW61 149 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 KCNIP1Q9NZI2 227 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 PIPOXQ9P0Z9 390 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ABRACLQ9P1F3 81 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 SSR3Q9UNL2 185 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 ING4Q9UNL4 249 aa3.91□□□□□ -1.78
PTCD3-213ENST00000480102 IGHV3OR16-10A0A075B7F0 116 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 IGHV1-3A0A0C4DH29 117 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MDFIC2A0A1B0GVS7 189 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PP11 408 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PPI3 338 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 A0A1W2PPK0 400 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR5H14A6NHG9 310 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF785A8K8V0 405 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MFNGO00587 321 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 BRI3O95415 125 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 HBZP02008 142 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TFF1P04155 84 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 IGF1P05019 195 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 HSMCR30P0CW71 290 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 HIST1H1DP16402 221 aaKnown RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 COX7A1P24310 79 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 GADD45AP24522 165 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 BLVRBP30043 206 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MC5RP33032 325 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 SSTR5P35346 364 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MAP2K4P45985 399 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 BLOC1S1P78537 153 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 KLRD1Q13241 179 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 INSL4Q14641 139 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 HERPUD1Q15011 391 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 PNLIPRP3Q17RR3 467 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MORN2Q502X0 79 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ATAD3CQ5T2N8 411 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 PRAMEF5Q5TYX0 476 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 HACD4Q5VWC8 232 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 SFXN4Q6P4A7 337 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF833PQ6ZTB9 187 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 Q6ZTK2 550 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 DYNAPQ8N1N2 210 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TSPAN14Q8NG11 270 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR51D1Q8NGF3 324 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR4A4PQ8NGN8 299 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR10K1Q8NGX5 313 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR10R2Q8NGX6 335 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 OR10X1Q8NGY0 326 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 NDNFQ8TB73 568 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 NEK7Q8TDX7 302 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 RTN4IP1Q8WWV3 396 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ARL11Q969Q4 196 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms