RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 TAS2R3Q9NYW6 316 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 CALYQ9NYX4 217 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4Q9UBX2 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 CLN8Q9UBY8 286 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 hADV38S2A0JD32 116 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 MSGN1A6NI15 193 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 ADAM20O43506 726 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GPR137BO60478 399 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 PITX3O75364 302 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 SCGB1D2O95969 90 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GYPAP02724 150 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GAPDHP04406 335 aaKnown RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 RAB7AP51149 207 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 LOXL3P58215 753 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 C17orf58Q2M2W7 97 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 ALKAL2Q6UX46 152 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 FOXRED2Q8IWF2 684 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 BAP18Q8IXM2 172 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 RFESDQ8TAC1 157 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 NEUROG1Q92886 237 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GPHA2Q96T91 129 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DCTN5Q9BTE1 182 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 C11orf1Q9H5F2 150 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 COA4Q9NYJ1 87 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GNG12Q9UBI6 72 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 KAAG1Q9UBP8 84 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 LPAR3Q9UBY5 353 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 LAMP3Q9UQV4 416 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DEFB108AA8MXU0 73 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 JTBO76095 146 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 NMBP08949 121 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 RRASP10301 218 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
RAD51B-208ENST00000479335 PPOXP50336 477 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 EIF5AL1Q6IS14 154 aaKnown RBP8.17□□□□□ -1.1
RAD51B-208ENST00000479335 PDZD9Q8IXQ8 264 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 ZCCHC24Q8N2G6 241 aaKnown RBP8.17□□□□□ -1.1
RAD51B-208ENST00000479335 MUC15Q8N387 334 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.17□□□□□ -1.1
RAD51B-208ENST00000479335 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 GPR146Q96CH1 333 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 ZC4H2Q9NQZ6 224 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 SDHAF2Q9NX18 166 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 GFOD1Q9NXC2 390 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 RNF150Q9ULK6 438 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 LINC00312Q9Y6C7 94 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 CHD8Q9HCK8 2581 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 TANC2Q9HCD6 1990 aa8.17□□□□□ -1.1
RAD51B-208ENST00000479335 DSCAML1Q8TD84 2053 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 IGHV1-69-2A0A0G2JMI3 117 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 LEUTXA8MZ59 168 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 FAM90A26D6RGX4 464 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 SIAH2O43255 324 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 CLDN14O95500 239 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 CLDN1O95832 211 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 PLAUP00749 431 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 IGKV1-39P01597 117 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 IGKV1D-39P04432 117 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 LPAR6P43657 344 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 ARHGDIBP52566 201 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 SNTB1Q13884 538 aaKnown RBP8.16□□□□□ -1.1
RAD51B-208ENST00000479335 CDSNQ15517 529 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 Q3ZCU0 254 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 CCL17Q92583 94 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 SLC25A31Q9H0C2 315 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 IDI2-AS1Q9NZ38 188 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 SLC25A10Q9UBX3 287 aaPredicted RBP8.16□□□□□ -1.1
RAD51B-208ENST00000479335 PSG11Q9UQ72 335 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 RCL1Q9Y2P8 373 aaKnown RBP8.16□□□□□ -1.1
RAD51B-208ENST00000479335 MMP24Q9Y5R2 645 aa8.16□□□□□ -1.1
RAD51B-208ENST00000479335 IGHV3-43A0A0B4J1X8 118 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 RBFOX2O43251 390 aaKnown RBP eCLIP8.15□□□□□ -1.13e-7■■■□□ 18
RAD51B-208ENST00000479335 KCNAB3O43448 404 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
RAD51B-208ENST00000479335 IGHV3-43DP0DP04 118 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
RAD51B-208ENST00000479335 GPR12P47775 334 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 TMEM33P57088 247 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 RPL30P62888 115 aaKnown RBP8.15□□□□□ -1.1
RAD51B-208ENST00000479335 VAMP2P63027 116 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 HFEQ30201 348 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
RAD51B-208ENST00000479335 TGIF2LYQ8IUE0 185 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 FGFRL1Q8N441 504 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 OR2C3Q8N628 320 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 FAM216BQ8N7L0 139 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 UBAC2Q8NBM4 344 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 RNASE11Q8TAA1 199 aaKnown RBP8.15□□□□□ -1.1
RAD51B-208ENST00000479335 C5orf30Q96GV9 206 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 RAB40CQ96S21 281 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 GAL3ST2Q9H3Q3 398 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 DCAF16Q9NXF7 216 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 HCFC1P51610 2035 aa8.15□□□□□ -1.1
RAD51B-208ENST00000479335 ARFGEF3Q5TH69 2177 aa8.15□□□□□ -1.11
RAD51B-208ENST00000479335 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
RAD51B-208ENST00000479335 KIAA1324LA8MWY0 1029 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms