RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ZNF818PQ6ZRF7 136 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 LHFPL4Q7Z7J7 247 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 OR9G1Q8NH87 305 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 C17orf50Q8WW18 174 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 LHX4Q969G2 390 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 ST6GALNAC6Q969X2 333 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 RTBDNQ9BSG5 229 aaPredicted RBP10.64□□□□□ -0.71
CHD3-210ENST00000479080 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 CLEC7AQ9BXN2 247 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 OR2D2Q9H210 308 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 MMP28Q9H239 520 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 C5orf66Q9H5L9 145 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 RAB9BQ9NP90 201 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 AUP1Q9Y679 476 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 TRAV40A0A0B4J280 105 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 LY6LH3BQJ8 138 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 CD5LO43866 347 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 PTTG1O95997 202 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 TCRBP04435 133 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
CHD3-210ENST00000479080 PAX6P26367 422 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 ZNF137PP52743 207 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 RPL39P5Q59GN2 51 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 FAHD2BQ6P2I3 314 aaPredicted RBP10.63□□□□□ -0.71
CHD3-210ENST00000479080 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 DRAM1Q8N682 238 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 ADAD2Q8NCV1 583 aaKnown RBP10.63□□□□□ -0.71
CHD3-210ENST00000479080 BEND2Q8NDZ0 799 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 SECTM1Q8WVN6 248 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 FAHD2AQ96GK7 314 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 RSRP1Q9BUV0 290 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 SLC5A7Q9GZV3 580 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 SDHAF2Q9NX18 166 aa10.63□□□□□ -0.71
CHD3-210ENST00000479080 A0A0B4J293 547 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 FAM240BA0A1B0GVZ2 78 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 CENPXA8MT69 81 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 J3QLI3 93 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 HSD17B6O14756 317 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 ARPC1BO15143 372 aaKnown RBP10.62□□□□□ -0.71
CHD3-210ENST00000479080 RGS11O94810 467 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 VSIG10L2P0DP72 767 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 GATA3P23771 443 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 LUMP51884 338 aaPredicted RBP10.62□□□□□ -0.71
CHD3-210ENST00000479080 DEFA1P59665 94 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 DEFA3P59666 94 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 HERV-K104P61576 105 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
CHD3-210ENST00000479080 RBMS2Q15434 407 aaKnown RBP10.62□□□□□ -0.71
CHD3-210ENST00000479080 MZT2BQ6NZ67 158 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 ZNF645Q8N7E2 425 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 OR13D1Q8NGV5 346 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 EDARADDQ8WWZ3 215 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 C18orf12Q96KH6 178 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 C20orf85Q9H1P6 137 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 DPAGT1Q9H3H5 408 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 HEXA-AS1Q9H8Q6 139 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 SCP2D1Q9UJQ7 156 aa10.62□□□□□ -0.71
CHD3-210ENST00000479080 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PPE2 198 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PR64 198 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 ARG1P05089 322 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 CTSDP07339 412 aaPredicted RBP10.61□□□□□ -0.71
CHD3-210ENST00000479080 PGAM2P15259 253 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 UBE2E1P51965 193 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 BRWD1-AS2P59051 145 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 SURF2Q15527 256 aaPredicted RBP10.61□□□□□ -0.71
CHD3-210ENST00000479080 RGS21Q2M5E4 152 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 FBLN7Q53RD9 439 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 NCR3LG1Q68D85 454 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
CHD3-210ENST00000479080 ZNF833PQ6ZTB9 187 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 LYG1Q8N1E2 194 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 ZDHHC22Q8N966 263 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 ENKURQ8TC29 256 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 NUDT15Q9NV35 164 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 GAB2Q9UQC2 676 aa10.61□□□□□ -0.71
CHD3-210ENST00000479080 TRAV6A0A075B6T7 132 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 LINC00473A8K010 186 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 TNFSF12O43508 249 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 ANXA7P20073 488 aaKnown RBP10.6□□□□□ -0.71
CHD3-210ENST00000479080 RAB7AP51149 207 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
CHD3-210ENST00000479080 RND3P61587 244 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 SUPT4H1P63272 117 aaKnown RBP10.6□□□□□ -0.71
CHD3-210ENST00000479080 MSMO1Q15800 293 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 BRD3OSQ6XYD6 125 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 IL17RELQ6ZVW7 336 aa10.6□□□□□ -0.71
CHD3-210ENST00000479080 SLC38A6Q8IZM9 456 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms