RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 OR4A4PQ8NGN8 299 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 OR4C13Q8NGP0 309 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 OR10J5Q8NHC4 309 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SPATA3Q8NHX4 192 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 RTN4IP1Q8WWV3 396 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 RBMXL1Q96E39 390 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 S100A16Q96FQ6 103 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 YPEL2Q96QA6 119 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 GINS4Q9BRT9 223 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SLC25A33Q9BSK2 321 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 BEX1Q9HBH7 125 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGKV1D-8A0A087WSZ0 117 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 A0A0A6YYH2 397 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 A6NJ64 397 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SSX5O60225 188 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 HPGDSO60760 199 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 NDUFA7O95182 113 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 FAM106CPP0CH98 169 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM11P17152 192 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 DTYMKP23919 212 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SOX6P35712 828 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 TMBIM6P55061 237 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 PITPNAQ00169 270 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF816Q0VGE8 651 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 HABP2Q14520 560 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 PNLIPRP3Q17RR3 467 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 RPL39P5Q59GN2 51 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 OR8H3Q8N146 312 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 GVQW1Q8N7I0 195 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 EDARADDQ8WWZ3 215 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 CFHR4Q92496 578 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 AP3S1Q92572 193 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 ISOC1Q96CN7 298 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 ABHD14BQ96IU4 210 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 MRPL20Q9BYC9 149 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 NPFFR1Q9GZQ6 430 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 ABCG5Q9H222 651 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IFI27L2Q9H2X8 130 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 AUNIPQ9H7T9 357 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 RDH8Q9NYR8 311 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 RNF150Q9ULK6 438 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SIGLEC9Q9Y336 463 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 MGAM2Q2M2H8 2515 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 SH2D7A6NKC9 451 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 FAM25AB3EWG3 89 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 FAM25CB3EWG5 89 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 FAM25GB3EWG6 89 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF736B4DX44 427 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 H3BMQ9 156 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 RGS5O15539 181 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 TXNL1O43396 289 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 XRCC3O43542 346 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF182P17025 639 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ELK1P19419 428 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 COMPP49747 757 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 TAS2R20P59543 309 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ARPC4P59998 168 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ODF3L1Q8IXM7 274 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 LINC01006Q8NI28 216 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ACOT12Q8WYK0 555 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 ST6GALNAC6Q969X2 333 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 AKR1E2Q96JD6 320 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 C11orf54Q9H0W9 315 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 OR2D2Q9H210 308 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 IFT46Q9NQC8 304 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 MRPS7Q9Y2R9 242 aaKnown RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
BRCA1-215ENST00000478531 RBM7Q9Y580 266 aaKnown RBP5.52□□□□□ -1.53
BRCA1-215ENST00000478531 SMIM31A0A1B0GVY4 71 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 CLPSL1A2RUU4 121 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 J3KRW8 73 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 J3QRK9 145 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 RAB29O14966 203 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 OR2F2O95006 317 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 APOA1P02647 267 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 GPR12P47775 334 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF137PP52743 207 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 BLCAPP62952 87 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ABCA11PQ4W5N1 156 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 RNASE12Q5GAN4 147 aaKnown RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 C9orf152Q5JTZ5 239 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 GLDNQ6ZMI3 551 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 SNX29P2Q8IUI4 249 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 BEST4Q8NFU0 473 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 OR2T6Q8NHC8 308 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 RBM14Q96PK6 669 aaKnown RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 S1PR3Q99500 378 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 BCL7BQ9BQE9 202 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ANXA10Q9UJ72 324 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF221Q9UK13 617 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 MOB4Q9Y3A3 225 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 WNK1Q9H4A3 2382 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 PLXNB1O43157 2135 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 TRBV6-7A0A0A0MS04 114 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 LINC00854A0A1B0GVQ3 168 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
BRCA1-215ENST00000478531 LANCL1O43813 399 aa5.51□□□□□ -1.53
BRCA1-215ENST00000478531 TSPAN9O75954 239 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms