RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 AMMECR1Q9Y4X0 333 aaPredicted RBP3.34□□□□□ -1.88
POLR2B-208ENST00000478188 MGAM2Q2M2H8 2515 aa3.34□□□□□ -1.88
POLR2B-208ENST00000478188 SAA2-SAA4A0A096LPE2 208 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 BTBD17A6NE02 478 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 DIRAS3O95661 229 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 IGLV2-14P01704 120 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 HSMCR30P0CW71 290 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 SAA2P0DJI9 122 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 SLC2A2P11168 524 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 GADD45AP24522 165 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NFYBP25208 207 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CD1BP29016 333 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 PPP1CCP36873 323 aaKnown RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 LGALS4P56470 323 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 MADCAM1Q13477 382 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 KIAA0141Q14154 515 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 STEAP3Q658P3 488 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 MOB1BQ7L9L4 216 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 OR10V1Q8NGI7 309 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NDNFQ8TB73 568 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 HSPB9Q9BQS6 159 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 MRPL20Q9BYC9 149 aaKnown RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 MMP27Q9H306 513 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 AP5S1Q9NUS5 200 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 ZNF107Q9UII5 783 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 PITPNC1Q9UKF7 332 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 IGKV1D-33P01593 117 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 IGKV1-33P01594 117 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CRYBA1P05813 215 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CRYGBP07316 175 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 FCGR3AP08637 254 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 ARSBP15848 533 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CEACAM3P40198 252 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 F2RL1P55085 397 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 LTC4SQ16873 150 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CCDC144NLQ6NUI1 221 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NDUFA11Q86Y39 141 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 TGIF2LXQ8IUE1 241 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NPBQ8NG41 125 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CENPOQ9BU64 300 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 ABHD14AQ9BUJ0 271 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 PRSS22Q9GZN4 317 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CCDC90BQ9GZT6 254 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 RAB22AQ9UL26 194 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 TRBV6-7A0A0A0MS04 114 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NOTOA8MTQ0 251 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 TOR1AO14656 332 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 TXNL1O43396 289 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 SCTP09683 121 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CT45A6P0DMU7 189 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CT45A5P0DMU8 189 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CT45A7P0DMV0 189 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 EGR2P11161 476 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 HIST1H1DP16402 221 aaKnown RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 RAB3BP20337 219 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CNTFRP26992 372 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 BLVRBP30043 206 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 OR3A3P47888 321 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 REG1BP48304 166 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 VEGFCP49767 419 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 NDPQ00604 133 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 ZNF260Q3ZCT1 412 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 BVESQ8NE79 360 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 OR5AN1Q8NGI8 311 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 OR5H6Q8NGV6 325 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 OR10R2Q8NGX6 335 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 DDB2Q92466 427 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 S100A13Q99584 98 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 CITED2Q99967 270 aaPredicted RBP3.33□□□□□ -1.88
POLR2B-208ENST00000478188 GAB2Q9UQC2 676 aa3.33□□□□□ -1.88
POLR2B-208ENST00000478188 COL7A1Q02388 2944 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 H0YJW9 148 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 IGLV2-23P01705 113 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 OPN1MWP04001 364 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 GAPDHP04406 335 aaKnown RBP3.32□□□□□ -1.88
POLR2B-208ENST00000478188 IGF1P05019 195 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 OPN1MW2P0DN77 364 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 OPN1MW3P0DN78 364 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 PPIFP30405 207 aaKnown RBP3.32□□□□□ -1.88
POLR2B-208ENST00000478188 BRS3P32247 399 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 VDAC2P45880 294 aaPredicted RBP3.32□□□□□ -1.88
POLR2B-208ENST00000478188 GPR12P47775 334 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 SCAND1P57086 179 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 SFXN4Q6P4A7 337 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 C18orf65Q6ZTR6 163 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 TPRA1Q86W33 373 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 PRR18Q8N4B5 295 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 OR2T6Q8NHC8 308 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 LGALS14Q8TCE9 139 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 RPEQ96AT9 228 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 S1PR3Q99500 378 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 C11orf54Q9H0W9 315 aaPredicted RBP3.32□□□□□ -1.88
POLR2B-208ENST00000478188 ABCG5Q9H222 651 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 C12orf4Q9NQ89 552 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 ABCB10Q9NRK6 738 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 LIN7CQ9NUP9 197 aaKnown RBP3.32□□□□□ -1.88
POLR2B-208ENST00000478188 TRAPPC2LQ9UL33 140 aa3.32□□□□□ -1.88
POLR2B-208ENST00000478188 FBXO7Q9Y3I1 522 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms