RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ZNF137PP52743 207 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 TMBIM6P55061 237 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 TAS2R20P59543 309 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-222ENST00000478095 PNLIPRP3Q17RR3 467 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 RPL39P5Q59GN2 51 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 TMEM69Q5SWH9 247 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 GVQW1Q8N7I0 195 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 C3orf56Q8N813 242 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 OR4C13Q8NGP0 309 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 LINC01006Q8NI28 216 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 ISOC1Q96CN7 298 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 S100A16Q96FQ6 103 aaKnown RBP8.22□□□□□ -1.09
HDAC6-222ENST00000478095 ABHD14BQ96IU4 210 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 CABLES2Q9BTV7 478 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
HDAC6-222ENST00000478095 NPFFR1Q9GZQ6 430 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 C11orf54Q9H0W9 315 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-222ENST00000478095 AUNIPQ9H7T9 357 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 BEX1Q9HBH7 125 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 RAB18Q9NP72 206 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 RDH8Q9NYR8 311 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 RNF150Q9ULK6 438 aa8.22□□□□□ -1.09
HDAC6-222ENST00000478095 TRBV6-7A0A0A0MS04 114 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 A0A0A6YYH2 397 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 CCDC160A6NGH7 325 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 A6NJ64 397 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 FAM90A9PA6NNJ1 464 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 H3BMQ9 156 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 XRCC3O43542 346 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 TSPAN9O75954 239 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 LPLP06858 475 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 FAM106CPP0CH98 169 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF182P17025 639 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-222ENST00000478095 TMEM11P17152 192 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 ELK1P19419 428 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 BLCAPP62952 87 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 PITPNAQ00169 270 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 LY6G6FQ5SQ64 297 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 OR10J5Q8NHC4 309 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 ACOT12Q8WYK0 555 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 AP3S1Q92572 193 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 GINS4Q9BRT9 223 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 SLC25A33Q9BSK2 321 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 MRPS7Q9Y2R9 242 aaKnown RBP8.21□□□□□ -1.1
HDAC6-222ENST00000478095 RNF114Q9Y508 228 aa8.21□□□□□ -1.1
HDAC6-222ENST00000478095 CLPSL1A2RUU4 121 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 FAM25AB3EWG3 89 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 FAM25CB3EWG5 89 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 FAM25GB3EWG6 89 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 J3QRK9 145 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 TXNL1O43396 289 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 LANCL1O43813 399 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 OR2F2O95006 317 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 APOA1P02647 267 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 SOX6P35712 828 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 SRSF4Q08170 494 aaKnown RBP8.2□□□□□ -1.1
HDAC6-222ENST00000478095 LSAMPQ13449 338 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 SRSF7Q16629 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC6-222ENST00000478095 TMEM95Q3KNT9 176 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 MZT2AQ6P582 158 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 Q6ZS46 218 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 Q6ZS49 121 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 DYNC2LI1Q8TCX1 351 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 RBM14Q96PK6 669 aaKnown RBP8.2□□□□□ -1.1
HDAC6-222ENST00000478095 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 BCL7BQ9BQE9 202 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 ZNF251Q9BRH9 671 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 PIPOXQ9P0Z9 390 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 MMP24Q9Y5R2 645 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 CEPT1Q9Y6K0 416 aa8.2□□□□□ -1.1
HDAC6-222ENST00000478095 STAB1Q9NY15 2570 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 RAB29O14966 203 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 OR8U9P0C7N5 309 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 NFYAP23511 347 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 GPR12P47775 334 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 ARPC4P59998 168 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 ABCA11PQ4W5N1 156 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 GLDNQ6ZMI3 551 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 HOGA1Q86XE5 327 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 SNX29P2Q8IUI4 249 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 DRAXINQ8NBI3 349 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 BEST4Q8NFU0 473 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 OR8U1Q8NH10 309 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 OR2T6Q8NHC8 308 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 AKR1E2Q96JD6 320 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 S1PR3Q99500 378 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 OR2D2Q9H210 308 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 RANBP3Q9H6Z4 567 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 IFT46Q9NQC8 304 aa8.19□□□□□ -1.1
HDAC6-222ENST00000478095 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
HDAC6-222ENST00000478095 ANXA10Q9UJ72 324 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms