RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	IFITM5	A6NNB3	132 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	ITGB1BP1	O14713	200 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	DUS4L	O95620	317 aa	Known RBP	10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	PRB2	P02812	416 aa	Predicted RBP	10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	SCT	P09683	121 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	SLC2A2	P11168	524 aa	Predicted RBP	10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	CEACAM6	P40199	344 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	OR10A3	P58181	314 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	MRPS15	P82914	257 aa	Known RBP	10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	PLAC9	Q5JTB6	97 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	UBE2U	Q5VVX9	321 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	SPART	Q8N0X7	666 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	EDARADD	Q8WWZ3	215 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	FCGR1B	Q92637	280 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	RCC1L	Q96I51	464 aa	Known RBP	10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	HSPB9	Q9BQS6	159 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	NECAP2	Q9NVZ3	263 aa		10.86	□□□□□ -0.67
HDAC7-222	ENST00000477937	SHISA3	A0PJX4	238 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	TRDC	B7Z8K6	153 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	NBR2	O15453	112 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	CD3G	P09693	182 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	VDAC1	P21796	283 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	GADD45A	P24522	165 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	PSMB9	P28065	219 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	THBS3	P49746	956 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	PLA2G7	Q13093	441 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	FOXE3	Q13461	319 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	FOXB2	Q5VYV0	432 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	C22orf42	Q6IC83	251 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	ZNF695	Q8IW36	515 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	KLHL30-AS1	Q8NEE0	82 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	RAB3C	Q96E17	227 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	ABHD14B	Q96IU4	210 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	CHCHD6	Q9BRQ6	235 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	AGMAT	Q9BSE5	352 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	OR1A1	Q9P1Q5	309 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	KIAA1456	Q9P272	454 aa		10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	ZNF107	Q9UII5	783 aa	Predicted RBP	10.85	□□□□□ -0.67
HDAC7-222	ENST00000477937	METTL21EP	A6NDL7	271 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	OR5H14	A6NHG9	310 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	IGF1	P05019	195 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	RPLP1	P05386	114 aa	Known RBP	10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	ELANE	P08246	267 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	CT45A6	P0DMU7	189 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	CT45A5	P0DMU8	189 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	CT45A7	P0DMV0	189 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	OR5H8	P0DN80	308 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	RAB6A	P20340	208 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	CNTFR	P26992	372 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	FGF9	P31371	208 aa	Predicted RBP	10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	MC5R	P33032	325 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	RPL39P5	Q59GN2	51 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	ETV3L	Q6ZN32	361 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	C18orf65	Q6ZTR6	163 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	C8orf86	Q6ZUL3	223 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	MRPL41	Q8IXM3	137 aa	Known RBP	10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	LINC00482	Q8N8I6	264 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	NPB	Q8NG41	125 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	OR10R2	Q8NGX6	335 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	PTX4	Q96A99	478 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	RITA1	Q96K30	269 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	PARP12	Q9H0J9	701 aa	Known RBP	10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	ZNF580	Q9UK33	172 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	TG	P01266	2768 aa		10.84	□□□□□ -0.67
HDAC7-222	ENST00000477937	IGHG4	P01861	327 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	MYCNOS	P40205	109 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	CDX1	P47902	265 aa	Predicted RBP	10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	C5orf64	Q2M2E5	130 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	MOGAT2	Q3SYC2	334 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	LIN54	Q6MZP7	749 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	FAM131A	Q6UXB0	335 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	OR4A4P	Q8NGN8	299 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	KCTD7	Q96MP8	289 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	TXNL4B	Q9NX01	149 aa	Known RBP	10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	ZNF221	Q9UK13	617 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	RNF150	Q9ULK6	438 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	SSR3	Q9UNL2	185 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937	KCNK7	Q9Y2U2	307 aa		10.83	□□□□□ -0.68
HDAC7-222	ENST00000477937		A0A075B6Q4	140 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937		A0A0B4J203	849 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937		H7C2Y5	167 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	NDUFA3	O95167	84 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	HLA-DRB1	P01911	266 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	GSTP1	P09211	210 aa	Known RBP	10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	GNB3	P16520	340 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	SERPINB10	P48595	397 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	CFHR3	Q02985	330 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	KIR2DS1	Q14954	304 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	LCNL1	Q6ZST4	164 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	TPRA1	Q86W33	373 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	RNF152	Q8N8N0	203 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	OR5AN1	Q8NGI8	311 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	MRAP	Q8TCY5	172 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	P2RX4	Q99571	388 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	GPR61	Q9BZJ8	451 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	ATG5	Q9H1Y0	275 aa		10.82	□□□□□ -0.68
HDAC7-222	ENST00000477937	OR51J1	Q9H342	316 aa		10.82	□□□□□ -0.68

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