RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 MED10Q9BTT4 135 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 ZNF426Q9BUY5 554 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 TTTY12Q9BZ98 90 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 CENPHQ9H3R5 247 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 MAT2BQ9NZL9 334 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 C3orf18Q9UK00 162 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 OR51B4Q9Y5P0 310 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 ROCK1Q13464 1354 aa1.2□□□□□ -2.22
TARDBP-208ENST00000477447 USP42Q9H9J4 1324 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 A0A1W2PQL4 384 aaPredicted RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 GOLGA6L10A6NI86 522 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 KNCNA6PVL3 124 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 ODF3BA8MYP8 253 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 E5RI56 91 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 GOLGA6L19H0YKK7 550 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 LY6LH3BQJ8 138 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 J3QLI3 93 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 RAB36O95755 333 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 FABP1P07148 127 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 CRYGDP07320 174 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 KRT7P08729 469 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 OR4A8P0C604 315 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 OCMP0CE72 109 aaPredicted RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 MSNP26038 577 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 G0S2P27469 103 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 MAGEA2P43356 314 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 SMARCA2P51531 1590 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 NKX2-5P52952 324 aaPredicted RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 CEBPGP53567 150 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 AP3S2P59780 193 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 GABARAPL2P60520 117 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 C1QTNF8P60827 252 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 LSM6P62312 80 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 DYNLL1P63167 89 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 MGAT3Q09327 533 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 MED21Q13503 144 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 UAP1Q16222 522 aaPredicted RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 TMEM249Q2WGJ8 235 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 SLC36A2Q495M3 483 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 OR10J3Q5JRS4 329 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 TIMM23BQ5SRD1 257 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 SYPL2Q5VXT5 272 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 EBLN2Q6P2I7 272 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 ZNF767PQ75MW2 155 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 VWDEQ8N2E2 1590 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 C2orf73Q8N5S3 287 aaPredicted RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 OR4C16Q8NGL9 310 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 OR11L1Q8NGX0 322 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 RNASE11Q8TAA1 199 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 CD200R1Q8TD46 325 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 EBNA1BP2Q99848 306 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 PRRT1Q99946 306 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 TXNDC17Q9BRA2 123 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 DMAC2Q9NW81 257 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 USE1Q9NZ43 259 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 FBXL3Q9UKT7 428 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 SLC22A13Q9Y226 551 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 EIF3AQ14152 1382 aaKnown RBP1.19□□□□□ -2.22
TARDBP-208ENST00000477447 SORL1Q92673 2214 aa1.19□□□□□ -2.22
TARDBP-208ENST00000477447 COL5A3P25940 1745 aaPredicted RBP1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ZFYVE9O95405 1425 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 A0A0J9YX75 114 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 C2orf74A8MZ97 194 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 TMEM114B3SHH9 223 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 B4DEV8 164 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 SGCEO43556 437 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 NDUFA2O43678 99 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 LYPLA2O95372 231 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 DEXIO95424 95 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 SNAP29O95721 258 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 LDOC1O95751 146 aaPredicted RBP1.18□□□□□ -2.22
TARDBP-208ENST00000477447 IFNA5P01569 189 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ATF1P18846 271 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 PSMA1P25786 263 aaKnown RBP1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ALDH3A1P30838 453 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 UGT2B10P36537 528 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 GABRA4P48169 554 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 TMEM33P57088 247 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 SPCS3P61009 180 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 CCL7P80098 99 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 BSPH1Q075Z2 132 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 HTR4Q13639 388 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 FLOT2Q14254 428 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 OR4D1Q15615 310 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 MAPK14Q16539 360 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 FAM229BQ4G0N7 80 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 SPOPLQ6IQ16 392 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 MRPL52Q86TS9 123 aaKnown RBP1.18□□□□□ -2.22
TARDBP-208ENST00000477447 CRLF3Q8IUI8 442 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 FUNDC1Q8IVP5 155 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 C10orf67Q8IYJ2 551 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ZFAND2AQ8N6M9 145 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 RORBQ92753 470 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 GALMQ96C23 342 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 CAPZA3Q96KX2 299 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 OR51E2Q9H255 320 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 HRASLSQ9HDD0 168 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 ASCL3Q9NQ33 180 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 C19orf12Q9NSK7 152 aa1.18□□□□□ -2.22
TARDBP-208ENST00000477447 PLEKHJ1Q9NW61 149 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms