RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 NOTCH1P46531 2555 aa8.1□□□□□ -1.11
CCM2-208ENST00000476594 SAA2-SAA4A0A096LPE2 208 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 LDLRAD4O15165 306 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 RBBP9O75884 186 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 DIRAS3O95661 229 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 SAA2P0DJI9 122 aaPredicted RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 CEACAM6P40199 344 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 CBX3Q13185 183 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 ARFRP1Q13795 201 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 PNLIPRP3Q17RR3 467 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 CXorf66Q5JRM2 361 aaPredicted RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 Q8N9W7 124 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 DPF1Q92782 380 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 NABP2Q9BQ15 211 aa8.09□□□□□ -1.11
CCM2-208ENST00000476594 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 TXNL4BQ9NX01 149 aaKnown RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 RRP15Q9Y3B9 282 aaKnown RBP8.09□□□□□ -1.11
CCM2-208ENST00000476594 FOXI3A8MTJ6 420 aaPredicted RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 H7C2Y5 167 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 NBR2O15453 112 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 ST8SIA5O15466 376 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 FABP7O15540 132 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 WIPF1O43516 503 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 TMEM127O75204 238 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 APOA2P02652 100 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 ELANEP08246 267 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 GSTP1P09211 210 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 HIST1H1DP16402 221 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 TMEM50BP56557 158 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 SCAND1P57086 179 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 OR10A3P58181 314 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 ACTBP60709 375 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 RPL23AP62750 156 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 PITPNAQ00169 270 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 PLGLAQ15195 96 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 FBLN7Q53RD9 439 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 FAM53AQ6NSI3 398 aaPredicted RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 ZNF329Q86UD4 541 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 FAM71E2Q8N5Q1 922 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 OR10J5Q8NHC4 309 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 RCC1LQ96I51 464 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 RNF5Q99942 180 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 GINS4Q9BRT9 223 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 MCRIP2Q9BUT9 160 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 ATG5Q9H1Y0 275 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 IFI27L2Q9H2X8 130 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 ZMAT5Q9UDW3 170 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 ZNF580Q9UK33 172 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
CCM2-208ENST00000476594 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
CCM2-208ENST00000476594 A0A075B6Q4 140 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 FCGR3AP08637 254 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
CCM2-208ENST00000476594 FOXE3Q13461 319 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 SRSF7Q16629 238 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCM2-208ENST00000476594 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 TMEM65Q6PI78 240 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 C1QL4Q86Z23 238 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 CROCCP3Q8IVE0 287 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 ODF3L1Q8IXM7 274 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 NOL4LQ96MY1 436 aaPredicted RBP8.07□□□□□ -1.12
CCM2-208ENST00000476594 HDHD3Q9BSH5 251 aaPredicted RBP8.07□□□□□ -1.12
CCM2-208ENST00000476594 RNF150Q9ULK6 438 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 WASHC3Q9Y3C0 194 aa8.07□□□□□ -1.12
CCM2-208ENST00000476594 A0A087WXM4 84 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 LOC100506127A0A0U1RQW1 187 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 ZNF736B4DX44 427 aaPredicted RBP8.06□□□□□ -1.12
CCM2-208ENST00000476594 G3V4G9 280 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 RAB27BO00194 218 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 MFNGO00587 321 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 BET1O15155 118 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 SPDEFO95238 335 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 IGF1P05019 195 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 TFAP2AP05549 437 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 SCTP09683 121 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 CTXN2P0C2S0 81 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 SLC2A2P11168 524 aaPredicted RBP8.06□□□□□ -1.12
CCM2-208ENST00000476594 GNB3P16520 340 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 DTYMKP23919 212 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 CD40LGP29965 261 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 OR3A3P47888 321 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 F2RL1P55085 397 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 TMEM267Q0VDI3 215 aaPredicted RBP8.06□□□□□ -1.12
CCM2-208ENST00000476594 NEDD8Q15843 81 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 C5orf64Q2M2E5 130 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 PLAC9Q5JTB6 97 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 LIN54Q6MZP7 749 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 SFXN4Q6P4A7 337 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 FAM131AQ6UXB0 335 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 PDPNQ86YL7 162 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 ZNF695Q8IW36 515 aa8.06□□□□□ -1.12
CCM2-208ENST00000476594 TCTEX1D1Q8N7M0 179 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms