RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 C11orf1Q9H5F2 150 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 FAM206AQ9NX38 181 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 GLS2Q9UI32 602 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 DNAJC12Q9UKB3 198 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 KIAA2026Q5HYC2 2103 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 CHD5Q8TDI0 1954 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 ADGRB3O60242 1522 aa1.25□□□□□ -2.21
LTN1-204ENST00000475344 ADAMTSL1Q8N6G6 1762 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 LINC00854A0A1B0GVQ3 168 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 H3BPC8 53 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 H3BRN7 92 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 M0QX08 132 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 UBFD1O14562 309 aaKnown RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 SCN2BO60939 215 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 CD36P16671 472 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 PVALBP20472 110 aaPredicted RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 CFL1P23528 166 aaKnown RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 NPPCP23582 126 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 PPP1CCP36873 323 aaKnown RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 TSPEAR-AS2P59090 65 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 DAD1P61803 113 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 FAM45BPQ6NSW5 357 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 RASL11AQ6T310 242 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 DOLPP1Q86YN1 238 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 TMEM75Q8N9X5 138 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 STOML3Q8TAV4 291 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 FNDC9Q8TBE3 224 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 ABHD14BQ96IU4 210 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 CFAP53Q96M91 514 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 OR7D2Q96RA2 312 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 ZNF471Q9BX82 626 aaPredicted RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 GNB1LQ9BYB4 327 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 MED28Q9H204 178 aa1.24□□□□□ -2.21
LTN1-204ENST00000475344 CHMP4BQ9H444 224 aaKnown RBP1.24□□□□□ -2.21
LTN1-204ENST00000475344 C19orf71A6NCJ1 209 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 TMEM235A6NFC5 223 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 TRPC5OSA6NMA1 111 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 COPEO14579 308 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 TOX3O15405 576 aaPredicted RBP1.23□□□□□ -2.21
LTN1-204ENST00000475344 NEMFO60524 1076 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 ADAP1O75689 374 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 GZMBP10144 247 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 ORM2P19652 201 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 F8A1P23610 371 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 CD200P41217 278 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 CRATP43155 626 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 ZNHIT3Q15649 155 aaPredicted RBP1.23□□□□□ -2.21
LTN1-204ENST00000475344 OR4X1Q8NH49 305 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 ACY3Q96HD9 319 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 TBX5Q99593 518 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 ZNF426Q9BUY5 554 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 NKX6-2Q9C056 277 aaPredicted RBP1.23□□□□□ -2.21
LTN1-204ENST00000475344 METTL9Q9H1A3 318 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 MINOS1-NBL1R4GNA1 71 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 NPATQ14207 1427 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 NCKAP5O14513 1909 aa1.23□□□□□ -2.21
LTN1-204ENST00000475344 SCN9AQ15858 1988 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ERICH2A1L162 156 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 FNDC10F2Z333 226 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ARL6IP5O75915 188 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 SOD1P00441 154 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 HBZP02008 142 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 CRYBA1P05813 215 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ESDP10768 282 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ADORA1P30542 326 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 TAS2R45P59539 299 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ACTBP60709 375 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 ACTG1P63261 375 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 PRDX4Q13162 271 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 LRRC26Q2I0M4 334 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 TBC1D28Q2M2D7 210 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 PLCZ1Q86YW0 608 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 BLIDQ8IZY5 108 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 OR2D3Q8NGH3 330 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 OR5L1Q8NGL2 311 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 DCANP1Q8TF63 244 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 MRPS24Q96EL2 167 aaKnown RBP1.22□□□□□ -2.21
LTN1-204ENST00000475344 ATP6V1G3Q96LB4 118 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 TRNT1Q96Q11 434 aaKnown RBP1.22□□□□□ -2.21
LTN1-204ENST00000475344 C16orf95Q9H693 158 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 SPACA1Q9HBV2 294 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 NDUFB11Q9NX14 153 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 SNX12Q9UMY4 172 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 DOCK10Q96BY6 2186 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 GBF1Q92538 1859 aa1.22□□□□□ -2.21
LTN1-204ENST00000475344 MDC1Q14676 2089 aaKnown RBP1.21□□□□□ -2.22
LTN1-204ENST00000475344 NAV1Q8NEY1 1877 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 SLC17A3O00476 420 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 PSMG1O95456 288 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 OR13C7P0DN81 318 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 CRHBPP24387 322 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 GRPRP30550 384 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 HSPA9P38646 679 aaKnown RBP1.21□□□□□ -2.22
LTN1-204ENST00000475344 H2BFSP57053 126 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 SNAP25P60880 206 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.21□□□□□ -2.22
LTN1-204ENST00000475344 ZNF283Q8N7M2 679 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 CCDC112Q8NEF3 446 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 LFNGQ8NES3 379 aa1.21□□□□□ -2.22
LTN1-204ENST00000475344 TLCD1Q96CP7 247 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms